RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 SPDYAQ5MJ70 313 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 ZNF606Q8WXB4 792 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 TRIM62Q9BVG3 475 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 XPNPEP1Q9NQW7 623 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 PTTG2Q9NZH5 202 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 SEPT10Q9P0V9 454 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 TUBGCP4Q9UGJ1 667 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 CDH22Q9UJ99 828 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 hCG_1818297A0A087WSY0 165 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 TNFAIP8O95379 198 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 INHAP05111 366 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 CD48P09326 243 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 TFPTP0C1Z6 253 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 UNGP13051 313 aaPredicted RBP11.79□□□□□ -0.52
CCND1-201ENST00000227507 SMPD1P17405 629 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 SOX11P35716 441 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 MRPS6P82932 125 aaKnown RBP11.79□□□□□ -0.52
CCND1-201ENST00000227507 ITGA7Q13683 1181 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 CORO1BQ9BR76 489 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 HBS1LQ9Y450 684 aaKnown RBP11.79□□□□□ -0.52
CCND1-201ENST00000227507 COL1A2P08123 1366 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 ZC3H11AO75152 810 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCND1-201ENST00000227507 TGDSO95455 350 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 ODC1P11926 461 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 SLC1A6P48664 564 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 CLCN2P51788 898 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 CUL2Q13617 745 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 ITGA9Q13797 1035 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 DPYSL3Q14195 570 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 PAN2Q504Q3 1202 aaKnown RBP11.79□□□□□ -0.52
CCND1-201ENST00000227507 ZFP28Q8NHY6 868 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 GIPC3Q8TF64 312 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 EURLQ9NYK6 297 aa11.79□□□□□ -0.52
CCND1-201ENST00000227507 ASGR1P07306 291 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 SERPINA6P08185 405 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 PSMC3P17980 439 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 GNL1P36915 607 aaPredicted RBP11.78□□□□□ -0.52
CCND1-201ENST00000227507 GRIK1P39086 918 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 CRADDP78560 199 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 CAPSQ13938 189 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 GK3PQ14409 553 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 PCBP1Q15365 356 aaKnown RBP eCLIP11.78□□□□□ -0.521e-6■■□□□ 14.3
CCND1-201ENST00000227507 N4BP2L1Q5TBK1 243 aaPredicted RBP11.78□□□□□ -0.52
CCND1-201ENST00000227507 PIWIL2Q8TC59 973 aaKnown RBP11.78□□□□□ -0.52
CCND1-201ENST00000227507 SREK1Q8WXA9 508 aaKnown RBP11.78□□□□□ -0.52
CCND1-201ENST00000227507 DDX1Q92499 740 aaKnown RBP11.78□□□□□ -0.52
CCND1-201ENST00000227507 C20orf96Q9NUD7 363 aaPredicted RBP11.78□□□□□ -0.52
CCND1-201ENST00000227507 PLLPQ9Y342 182 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 NR2E3Q9Y5X4 410 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 DDX60Q8IY21 1712 aaKnown RBP11.78□□□□□ -0.52
CCND1-201ENST00000227507 CXorf49A8MYA2 514 aaPredicted RBP11.78□□□□□ -0.52
CCND1-201ENST00000227507 ADSSP30520 456 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 RFC1P35251 1148 aaPredicted RBP11.78□□□□□ -0.52
CCND1-201ENST00000227507 SLC18A1P54219 525 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 NOMO3P69849 1222 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 MMRN1Q13201 1228 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 TLR1Q15399 786 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 BRSK2Q8IWQ3 736 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 ADAM2Q99965 735 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 FAM49BQ9NUQ9 324 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 THAP1Q9NVV9 213 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 DDX56Q9NY93 547 aaKnown RBP11.78□□□□□ -0.52
CCND1-201ENST00000227507 RRN3Q9NYV6 651 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 GNEQ9Y223 722 aaKnown RBP11.78□□□□□ -0.52
CCND1-201ENST00000227507 A0A088AWK7 358 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 ADCY6O43306 1168 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 NDUFB5O43674 189 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 KRT7P08729 469 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 MYCLP1P12525 358 aaPredicted RBP11.78□□□□□ -0.52
CCND1-201ENST00000227507 GTF2BQ00403 316 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 CLVS1Q8IUQ0 354 aaPredicted RBP11.78□□□□□ -0.52
CCND1-201ENST00000227507 TMEM161BQ8NDZ6 487 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 ADAM32Q8TC27 787 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 ZBTB45Q96K62 511 aaPredicted RBP11.78□□□□□ -0.52
CCND1-201ENST00000227507 KLC2Q9H0B6 622 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 GPAMQ9HCL2 828 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 GPATCH2LQ9NWQ4 482 aa11.78□□□□□ -0.52
CCND1-201ENST00000227507 NOL3O60936 208 aaKnown RBP11.77□□□□□ -0.52
CCND1-201ENST00000227507 STIP1P31948 543 aaKnown RBP11.77□□□□□ -0.52
CCND1-201ENST00000227507 MTTPP55157 894 aa11.77□□□□□ -0.52
CCND1-201ENST00000227507 PHEXP78562 749 aa11.77□□□□□ -0.52
CCND1-201ENST00000227507 ITKQ08881 620 aa11.77□□□□□ -0.52
CCND1-201ENST00000227507 DMPKQ09013 629 aa11.77□□□□□ -0.52
CCND1-201ENST00000227507 MAPRE1Q15691 268 aaKnown RBP11.77□□□□□ -0.52
CCND1-201ENST00000227507 FSCBQ5H9T9 825 aa11.77□□□□□ -0.52
CCND1-201ENST00000227507 BTBD8Q5XKL5 378 aa11.77□□□□□ -0.52
CCND1-201ENST00000227507 AAGABQ6PD74 315 aa11.77□□□□□ -0.52
CCND1-201ENST00000227507 TMC7Q7Z402 723 aa11.77□□□□□ -0.52
CCND1-201ENST00000227507 PQLC1Q8N2U9 271 aa11.77□□□□□ -0.52
CCND1-201ENST00000227507 SLC44A1Q8WWI5 657 aa11.77□□□□□ -0.52
CCND1-201ENST00000227507 SCYL1Q96KG9 808 aa11.77□□□□□ -0.52
CCND1-201ENST00000227507 ZMAT2Q96NC0 199 aaKnown RBP11.77□□□□□ -0.52
CCND1-201ENST00000227507 GMEB1Q9Y692 573 aa11.77□□□□□ -0.52
CCND1-201ENST00000227507 TNRC6CQ9HCJ0 1690 aaKnown RBP11.77□□□□□ -0.52
CCND1-201ENST00000227507 CCDC78A2IDD5 438 aa11.77□□□□□ -0.53
CCND1-201ENST00000227507 ITM2AO43736 263 aa11.77□□□□□ -0.53
CCND1-201ENST00000227507 TPST1O60507 370 aa11.77□□□□□ -0.53
CCND1-201ENST00000227507 SIN3BO75182 1162 aa11.77□□□□□ -0.53
CCND1-201ENST00000227507 ABCG1P45844 678 aa11.77□□□□□ -0.53
CCND1-201ENST00000227507 TMED10P49755 219 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms