RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 COLGALT2Q8IYK4 626 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 DNAJC9Q8WXX5 260 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 GFM2Q969S9 779 aaKnown RBP19.31■□□□□ 0.68
SMPD3-201ENST00000219334 SMAD5Q99717 465 aaKnown RBP19.31■□□□□ 0.68
SMPD3-201ENST00000219334 MRPL42Q9Y6G3 142 aaKnown RBP19.31■□□□□ 0.68
SMPD3-201ENST00000219334 SEC22BO75396 215 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 ATP6V1B2P21281 511 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 FLT3LGP49771 235 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 SERPINH1P50454 418 aaKnown RBP19.31■□□□□ 0.68
SMPD3-201ENST00000219334 PSMD5Q16401 504 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 CRY1Q16526 586 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 ZC3H12AQ5D1E8 599 aaKnown RBP19.31■□□□□ 0.68
SMPD3-201ENST00000219334 MFSD7Q6UXD7 560 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 MOB2Q70IA6 237 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 CLYBLQ8N0X4 340 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 ZSWIM2Q8NEG5 633 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 TRPM4Q8TD43 1214 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 USP7Q93009 1102 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 AGXT2Q9BYV1 514 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 MIR1-1HGQ9H1L0 117 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 BTN3A1O00481 513 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 ATP6V1C1P21283 382 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 PKN2Q16513 984 aaKnown RBP19.31■□□□□ 0.68
SMPD3-201ENST00000219334 PAPD7Q5XG87 772 aaKnown RBP19.31■□□□□ 0.68
SMPD3-201ENST00000219334 AASDHPPTQ9NRN7 309 aa19.31■□□□□ 0.68
SMPD3-201ENST00000219334 FAM220BPB1ANY3 271 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 XPO1O14980 1071 aaKnown RBP19.3■□□□□ 0.68
SMPD3-201ENST00000219334 TARSP26639 723 aaKnown RBP19.3■□□□□ 0.68
SMPD3-201ENST00000219334 FMO4P31512 558 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 IRAK1P51617 712 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 CAPRIN2Q6IMN6 1127 aaKnown RBP19.3■□□□□ 0.68
SMPD3-201ENST00000219334 FBXL16Q8N461 479 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 SOHLH2Q9NX45 425 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 UBIAD1Q9Y5Z9 338 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 ARHGAP23Q9P227 1491 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 DNALI1O14645 258 aaPredicted RBP19.3■□□□□ 0.68
SMPD3-201ENST00000219334 DGKAP23743 735 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 CCT8P50990 548 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 MARSP56192 900 aaKnown RBP19.3■□□□□ 0.68
SMPD3-201ENST00000219334 CNGA2Q16280 664 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 CYP4Z2PQ8N1L4 340 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 PPP1R13LQ8WUF5 828 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 DISP2A7MBM2 1401 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 MT-CO1P00395 513 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 PRKAA2P54646 552 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 RHBDL3P58872 404 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 LUZP2Q86TE4 346 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 QRFPRQ96P65 431 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 BBS2Q9BXC9 721 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 ARL15Q9NXU5 204 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 STARD13Q9Y3M8 1113 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 KCNA3P22001 575 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 EARS2Q5JPH6 523 aaKnown RBP19.3■□□□□ 0.68
SMPD3-201ENST00000219334 N4BP2L1Q5TBK1 243 aaPredicted RBP19.3■□□□□ 0.68
SMPD3-201ENST00000219334 DCLRE1AQ6PJP8 1040 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 CYP20A1Q6UW02 462 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 MARK2Q7KZI7 788 aaKnown RBP19.3■□□□□ 0.68
SMPD3-201ENST00000219334 MID1IP1Q9NPA3 183 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.3■□□□□ 0.68
SMPD3-201ENST00000219334 GIT1Q9Y2X7 761 aa19.3■□□□□ 0.68
SMPD3-201ENST00000219334 PABPC1P11940 636 aaKnown RBP19.29■□□□□ 0.68
SMPD3-201ENST00000219334 PTENP60484 403 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 FNDC5Q8NAU1 212 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 ENTPD4Q9Y227 616 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 ANKRD6Q9Y2G4 727 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 SNX13Q9Y5W8 968 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 MOXD2PA6NHM9 499 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 ENO2P09104 434 aaPredicted RBP19.29■□□□□ 0.68
SMPD3-201ENST00000219334 VAC14Q08AM6 782 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 SHROOM1Q2M3G4 852 aaPredicted RBP19.29■□□□□ 0.68
SMPD3-201ENST00000219334 C1orf186Q6ZWK4 172 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 ATG16L2Q8NAA4 619 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 HNRNPLLQ8WVV9 542 aaKnown RBP19.29■□□□□ 0.68
SMPD3-201ENST00000219334 MLPHQ9BV36 600 aaPredicted RBP19.29■□□□□ 0.68
SMPD3-201ENST00000219334 SLC28A3Q9HAS3 691 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 PIH1D1Q9NWS0 290 aaKnown RBP19.29■□□□□ 0.68
SMPD3-201ENST00000219334 VWDEQ8N2E2 1590 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 ANKDD1BA6NHY2 528 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 PSMD10O75832 226 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 BGNP21810 368 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 NOS3P29474 1203 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 NCF4Q15080 339 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 FGD2Q7Z6J4 655 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 OPTCQ9UBM4 332 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 KLHL20Q9Y2M5 609 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 A0A096LPK6 155 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 CXCL14O95715 111 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 NFICP08651 508 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 RBM43Q6ZSC3 357 aaKnown RBP19.29■□□□□ 0.68
SMPD3-201ENST00000219334 TTC7BQ86TV6 843 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 METTL3Q86U44 580 aaKnown RBP19.29■□□□□ 0.68
SMPD3-201ENST00000219334 LPPQ93052 612 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 CXorf40BQ96DE9 158 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 BLOC1S4Q9NUP1 217 aa19.29■□□□□ 0.68
SMPD3-201ENST00000219334 APOC4-APOC2K7ER74 178 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 TRIM13O60858 407 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 APOC2P02655 101 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 FAM46CQ5VWP2 391 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 ARHGAP17Q68EM7 881 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 DENND1CQ8IV53 801 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms