RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 TRHDEQ9UKU6 1024 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 DERAQ9Y315 318 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 DLEC1Q9Y238 1755 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 CHEK2O96017 543 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 PTPN9P43378 593 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 SLC34A1Q06495 639 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 MAP7Q14244 749 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 ANKRD20A4Q4UJ75 823 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 PPM1JQ5JR12 505 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 TCHHL1Q5QJ38 904 aaPredicted RBP12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 DCP1BQ8IZD4 617 aaKnown RBP12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 UNC5BQ8IZJ1 945 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 RNF148Q8N7C7 305 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 CALML6Q8TD86 181 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 DCAKDQ8WVC6 231 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 MORF4L1Q9UBU8 362 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 ST3GAL5Q9UNP4 418 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 MYO18AQ92614 2054 aaKnown RBP12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 RREB1Q92766 1687 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 SMIM35A0A1B0GVV1 85 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 SLC15A5A6NIM6 579 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 ZMPSTE24O75844 475 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 SUPT7LO94864 414 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 BPGMP07738 259 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 HSPA8P11142 646 aaKnown RBP12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 RBBP5Q15291 538 aaKnown RBP12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 CNGA3Q16281 694 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 ZNF470Q6ECI4 717 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 PTAR1Q7Z6K3 402 aaPredicted RBP12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 FAM35AQ86V20 835 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 MPP5Q8N3R9 675 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 MRPL1Q9BYD6 325 aaKnown RBP12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 CAB39LQ9H9S4 337 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 PRR5-ARHGAP8B1AHC4 643 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 IQCF3P0C7M6 154 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 SOX11P35716 441 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 PLK1P53350 603 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 ARHGAP8P85298 464 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 CCDC15Q0P6D6 951 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 RARS2Q5T160 578 aaKnown RBP12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 CERCAMQ5T4B2 595 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 LRRC8EQ6NSJ5 796 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 IZUMO2Q6UXV1 221 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 C10orf107Q8IVU9 208 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 EFHBQ8N7U6 833 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 TMEM174Q8WUU8 243 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 ZNF512Q96ME7 567 aaPredicted RBP12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 ARHGEF3Q9NR81 526 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 SLC17A6Q9P2U8 582 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 PACSIN3Q9UKS6 424 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 MAGEB16A2A368 324 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 AKR1A1P14550 325 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 L1CAMP32004 1257 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 CRYBB1P53674 252 aaPredicted RBP12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 FLOT2Q14254 428 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 CCDC153Q494R4 210 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 OLFML1Q6UWY5 402 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 TMEM110Q86TL2 294 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 RELL1Q8IUW5 271 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 TSPAN17Q96FV3 270 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 FAXDC2Q96IV6 333 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 EML4Q9HC35 981 aaKnown RBP12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 NPY2RP49146 381 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 MAP2K5Q13163 448 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 PDAP1Q13442 181 aaKnown RBP12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 NBPF20Q3BBV1 942 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 LRRC74BQ6ZQY2 392 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 GALNT4Q8N4A0 578 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 C10orf82Q8WW14 230 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 PHF21BQ96EK2 531 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 ADAM2Q99965 735 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 CENPKQ9BS16 269 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 SLC4A5Q9BY07 1137 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 PHACTR1Q9C0D0 580 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 DENND2DQ9H6A0 471 aaPredicted RBP12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 ACSS2Q9NR19 701 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 RRN3Q9NYV6 651 aa12.62□□□□□ -0.39
TM9SF4-201ENST00000217315 GSC2O15499 205 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 SNX2O60749 519 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 NOL3O60936 208 aaKnown RBP12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 DAB1O75553 588 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 S100BP04271 92 aaPredicted RBP12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 THRAP10827 490 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 ACADSP16219 412 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 TPSB2P20231 275 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 BRCC3P46736 316 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 TBL3Q12788 808 aaKnown RBP12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 USP4Q13107 963 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 TPSAB1Q15661 275 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 EML3Q32P44 896 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 TMEM86AQ8N2M4 240 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.61□□□□□ -0.399e-7■■■■■ 54.9
TM9SF4-201ENST00000217315 QKIQ96PU8 341 aaKnown RBP eCLIP12.61□□□□□ -0.391e-11■■■■□ 21.4
TM9SF4-201ENST00000217315 MTG1Q9BT17 334 aaPredicted RBP12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 R3HDMLQ9H3Y0 253 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 ZNF395Q9H8N7 513 aaPredicted RBP12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 SNX15Q9NRS6 342 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 FAM105AQ9NUU6 356 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 SUN2Q9UH99 717 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 TRPV2Q9Y5S1 764 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms