RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 HAUS5O94927 633 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 SP2Q02086 613 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 C4orf22Q6V702 233 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 FAM183BPQ6ZVS7 135 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 UPF3AQ9H1J1 476 aaKnown RBP14.05□□□□□ -0.16
SIX4-201ENST00000216513 BLOC1S4Q9NUP1 217 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 NMRK1Q9NWW6 199 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 VPS51Q9UID3 782 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 CPQQ9Y646 472 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 MT-CO1P00395 513 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 GTF2BQ00403 316 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 USP4Q13107 963 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 SYDE1Q6ZW31 735 aaPredicted RBP14.05□□□□□ -0.16
SIX4-201ENST00000216513 LZTR1Q8N653 840 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 ETNPPLQ8TBG4 499 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 ATP6V1G3Q96LB4 118 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 LRRC72A6NJI9 287 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 C15orf59Q2T9L4 293 aaPredicted RBP14.04□□□□□ -0.16
SIX4-201ENST00000216513 GRASPQ7Z6J2 395 aaPredicted RBP14.04□□□□□ -0.16
SIX4-201ENST00000216513 OSCP1Q8WVF1 389 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 ELFN1P0C7U0 828 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 CYP2A7P20853 494 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 BLVRAP53004 296 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 PLA2G4EQ3MJ16 856 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 CRTC3Q6UUV7 619 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 MON1AQ86VX9 555 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 COLGALT2Q8IYK4 626 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 GALNT4Q8N4A0 578 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 PCCBP05166 539 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 EPS8L3Q8TE67 593 aaKnown RBP14.04□□□□□ -0.16
SIX4-201ENST00000216513 SPOCD1Q6ZMY3 1216 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 LRP10Q7Z4F1 713 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 PPIL6Q8IXY8 311 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 ANKRD52Q8NB46 1076 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 OXCT2Q9BYC2 517 aaPredicted RBP14.04□□□□□ -0.16
SIX4-201ENST00000216513 FANCEQ9HB96 536 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 Q9Y3F1 56 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 GNG14A0A1W2PPG7 69 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 ESRRGP62508 458 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 GAD2Q05329 585 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 PDCD2Q16342 344 aaPredicted RBP14.04□□□□□ -0.16
SIX4-201ENST00000216513 ZNF792Q3KQV3 632 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 SEMA4DQ92854 862 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 CA14Q9ULX7 337 aa14.04□□□□□ -0.16
SIX4-201ENST00000216513 AIM2O14862 343 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 ZNF7P17097 686 aaPredicted RBP14.03□□□□□ -0.16
SIX4-201ENST00000216513 RAD23BP54727 409 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 FAM83EQ2M2I3 478 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 CBWD6Q4V339 395 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 SETD3Q86TU7 594 aaPredicted RBP14.03□□□□□ -0.16
SIX4-201ENST00000216513 EXD1Q8NHP7 514 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 EEF1DP29692 281 aaKnown RBP14.03□□□□□ -0.16
SIX4-201ENST00000216513 STIP1P31948 543 aaKnown RBP14.03□□□□□ -0.16
SIX4-201ENST00000216513 SULT2A1Q06520 285 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 COL9A3Q14050 684 aaPredicted RBP14.03□□□□□ -0.16
SIX4-201ENST00000216513 PPP1R26Q5T8A7 1209 aaPredicted RBP14.03□□□□□ -0.16
SIX4-201ENST00000216513 DNAJC1Q96KC8 554 aaKnown RBP14.03□□□□□ -0.16
SIX4-201ENST00000216513 FERD3LQ96RJ6 166 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 BCO2Q9BYV7 579 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 ACP6Q9NPH0 428 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 MAFBQ9Y5Q3 323 aaPredicted RBP14.03□□□□□ -0.16
SIX4-201ENST00000216513 C10orf71Q711Q0 1435 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 A0A1W2PQJ5 194 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 STBD1O95210 358 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 ALPPL2P10696 532 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 PEX5P50542 639 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 GJA9P57773 515 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 DAB2IPQ5VWQ8 1189 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 TAF8Q7Z7C8 310 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 LRRC52Q8N7C0 313 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 SERPINI1Q99574 410 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 PRPF18Q99633 342 aaKnown RBP14.03□□□□□ -0.16
SIX4-201ENST00000216513 MLPHQ9BV36 600 aaPredicted RBP14.03□□□□□ -0.16
SIX4-201ENST00000216513 MPP6Q9NZW5 540 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 NAALADL1Q9UQQ1 740 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 KNDC1Q76NI1 1749 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 RNF103-CHMP3A0A140T963 221 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 SLC31A1O15431 190 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 BUD23O43709 281 aaKnown RBP14.03□□□□□ -0.16
SIX4-201ENST00000216513 IFNA16P05015 189 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 DGKGP49619 791 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 CAP1Q01518 475 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 AADACL2Q6P093 401 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 RFWD3Q6PCD5 774 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 FAM228AQ86W67 206 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 IL12RB2Q99665 862 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 TMEM121Q9BTD3 319 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 DRG1Q9Y295 367 aaKnown RBP14.03□□□□□ -0.16
SIX4-201ENST00000216513 SH3BGRLO75368 114 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 TTI2Q6NXR4 508 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 VSTM1Q6UX27 236 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 ELOA2Q8IYF1 753 aaPredicted RBP14.03□□□□□ -0.16
SIX4-201ENST00000216513 GLIS3Q8NEA6 775 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 PXYLP1Q8TE99 480 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 ZIM3Q96PE6 472 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 CACNG4Q9UBN1 327 aa14.03□□□□□ -0.16
SIX4-201ENST00000216513 CD86P42081 329 aa14.02□□□□□ -0.16
SIX4-201ENST00000216513 SLC5A3P53794 718 aa14.02□□□□□ -0.16
SIX4-201ENST00000216513 MBTD1Q05BQ5 628 aa14.02□□□□□ -0.16
SIX4-201ENST00000216513 C1QBPQ07021 282 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms