RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 NT5C3BQ969T7 300 aa10.93□□□□□ -0.66
APOBEC3D-201ENST00000216099 VMP1Q96GC9 406 aa10.93□□□□□ -0.66
APOBEC3D-201ENST00000216099 USP29Q9HBJ7 922 aa10.93□□□□□ -0.66
APOBEC3D-201ENST00000216099 PPANQ9NQ55 473 aaKnown RBP10.93□□□□□ -0.66
APOBEC3D-201ENST00000216099 PAK5Q9P286 719 aa10.93□□□□□ -0.66
APOBEC3D-201ENST00000216099 SLC24A2Q9UI40 661 aa10.93□□□□□ -0.66
APOBEC3D-201ENST00000216099 CHADO15335 359 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 GREM1O60565 184 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 MAGEA6P43360 314 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 GIPRP48546 466 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 NR2C2P49116 596 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 SEC24CP53992 1094 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 IRX1P78414 480 aaPredicted RBP10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 PRKCZQ05513 592 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 CA9Q16790 459 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 NPNTQ6UXI9 565 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 AGMOQ6ZNB7 445 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 CDKL3Q8IVW4 592 aaPredicted RBP10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 FAM71DQ8N9W8 422 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 PCSK9Q8NBP7 692 aaKnown RBP10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 C3orf58Q8NDZ4 430 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 SLC2A13Q96QE2 648 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 GAD1Q99259 594 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 NRDE2Q9H7Z3 1164 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 UBN1Q9NPG3 1134 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 INTS9Q9NV88 658 aaKnown RBP10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 GPATCH2LQ9NWQ4 482 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 CDH9Q9ULB4 789 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 AP4E1Q9UPM8 1137 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 MYO16Q9Y6X6 1858 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 ARL5CA6NH57 179 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 H3BRJ5 948 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 H7C0C1 242 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 CABYRO75952 493 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 ASGR1P07306 291 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 CYP2F1P24903 491 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 PHBP35232 272 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 ATP5OP48047 213 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 MRPS5P82675 430 aaKnown RBP10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 RNASELQ05823 741 aaKnown RBP10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 ADIGQ0VDE8 80 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 PDIA2Q13087 525 aaKnown RBP10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 KCNJ11Q14654 390 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 KCNA10Q16322 511 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 CTC1Q2NKJ3 1217 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 ANKRD22Q5VYY1 191 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 CYP4F22Q6NT55 531 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 ATP11CQ8NB49 1132 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 MDM1Q8TC05 714 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 SYT15Q9BQS2 421 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 YIPF2Q9BWQ6 316 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 DDX43Q9NXZ2 648 aaKnown RBP10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 IFT80Q9P2H3 777 aaPredicted RBP10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 ABT1Q9ULW3 272 aaKnown RBP10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 PCDHB10Q9UN67 800 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 NAALADL1Q9UQQ1 740 aa10.92□□□□□ -0.66
APOBEC3D-201ENST00000216099 SF3B1O75533 1304 aaKnown RBP eCLIP10.91□□□□□ -0.663e-9■■■■■ 93.6
APOBEC3D-201ENST00000216099 EXOC1LA0A1B0GW35 172 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 MEIS3P2A8K0S8 358 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 INPPL1O15357 1258 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 ATP2C2O75185 946 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 ZNF189O75820 626 aaPredicted RBP10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 TFE3P19532 575 aaPredicted RBP10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 DRD4P21917 467 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 ELF1P32519 619 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 TRPC1P48995 793 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 TRIM71Q2Q1W2 868 aaKnown RBP10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 MDH1BQ5I0G3 518 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 EFHC2Q5JST6 749 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 GK5Q6ZS86 529 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 CLEC20AQ6ZU45 233 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 MAML1Q92585 1016 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 CHMP6Q96FZ7 201 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 UROC1Q96N76 676 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 ZNF317Q96PQ6 595 aaPredicted RBP10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 KCTD15Q96SI1 283 aaPredicted RBP10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 ZIC5Q96T25 663 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 NPY6RQ99463 290 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 AGO3Q9H9G7 860 aaKnown RBP10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 MIOSQ9NXC5 875 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 MTMR10Q9NXD2 777 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 SENP1Q9P0U3 644 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 XPO7Q9UIA9 1087 aaKnown RBP10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 FZD10Q9ULW2 581 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 CAPN7Q9Y6W3 813 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 C9IYK1 514 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 AHCYL1O43865 530 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 TMEM63AO94886 807 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 CYP11A1P05108 521 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 CELA3AP09093 270 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 GCAP28676 217 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 PCSK1P29120 753 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 RAD52P43351 418 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 AIF1P55008 147 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 YWHAZP63104 245 aaKnown RBP10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 TRIM32Q13049 653 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 FASTKD3Q14CZ7 662 aaKnown RBP10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 UPP1Q16831 310 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 MZT2BQ6NZ67 158 aa10.91□□□□□ -0.66
APOBEC3D-201ENST00000216099 VSTM1Q6UX27 236 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms