RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 PPP1R12AO14974 1030 aaPredicted RBP16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 RBL1P28749 1068 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 IRAK1P51617 712 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 GALNT2Q10471 571 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 CUL1Q13616 776 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 BRD3Q15059 726 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 RARS2Q5T160 578 aaKnown RBP16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 DDX42Q86XP3 938 aaKnown RBP eCLIP16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 GLIS1Q8NBF1 620 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 LRRN4Q8WUT4 740 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 IFT81Q8WYA0 676 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 ANKRD7Q92527 254 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 LGMNQ99538 433 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 BRD8Q9H0E9 1235 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 DPH5Q9H2P9 285 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 PRDM12Q9H4Q4 367 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 PCDH9Q9HC56 1237 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 FAM114A2Q9NRY5 505 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 NDFIP2Q9NV92 336 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 CFAP97Q9P2B7 532 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 ASIC3Q9UHC3 531 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 SNX24Q9Y343 169 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 SH3BP1Q9Y3L3 701 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 NUP205Q92621 2012 aa16.39■□□□□ 0.21
SNRPD3-201ENST00000215829 TMEM265A0A087WTH1 108 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 LINC01565O15544 149 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 KCNN4O15554 427 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 IFNB1P01574 187 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 ZSCAN5DPP0CG00 497 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 ETS1P14921 441 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 H2AFXP16104 143 aaPredicted RBP16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 CEBPBP17676 345 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 CARSP49589 748 aaKnown RBP16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 PRKD1Q15139 912 aaPredicted RBP16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 RABGAP1LQ5R372 815 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 AFMIDQ63HM1 303 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 ANKRD54Q6NXT1 300 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 PRUNE1Q86TP1 453 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 ARHGAP12Q8IWW6 846 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 UMODL1-AS1Q8N2C9 162 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 EIF1ADQ8N9N8 165 aaKnown RBP16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 ITFG1Q8TB96 612 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 RTP4Q96DX8 246 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 CELF6Q96J87 481 aaKnown RBP16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 SMG9Q9H0W8 520 aaKnown RBP16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 TDP1Q9NUW8 608 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 ZNF212Q9UDV6 495 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 COLQQ9Y215 455 aaPredicted RBP16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 CCDC151A5D8V7 595 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 IVDP26440 423 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 ADCY8P40145 1251 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 GARSP41250 739 aaKnown RBP16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 RPL21P46778 160 aaKnown RBP16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 ADAM15Q13444 863 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 SYCE2Q6PIF2 218 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 TFAP2DQ7Z6R9 452 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 GPR149Q86SP6 731 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 FAM217AQ8IXS0 508 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 CFAP52Q8N1V2 620 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 CCNYQ8ND76 341 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 SH3RF2Q8TEC5 729 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 USP13Q92995 863 aaPredicted RBP16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 HDAC11Q96DB2 347 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 ZSWIM3Q96MP5 696 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 TTYH1Q9H313 450 aaPredicted RBP16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 ARGLU1Q9NWB6 273 aaPredicted RBP16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 CCL26Q9Y258 94 aa16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 ZFP37Q9Y6Q3 630 aaPredicted RBP16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 HELZP42694 1942 aaKnown RBP16.38■□□□□ 0.21
SNRPD3-201ENST00000215829 E2F8A0AVK6 867 aa16.37■□□□□ 0.21
SNRPD3-201ENST00000215829 TRDMT1O14717 391 aaKnown RBP16.37■□□□□ 0.21
SNRPD3-201ENST00000215829 ZNF189O75820 626 aaPredicted RBP16.37■□□□□ 0.21
SNRPD3-201ENST00000215829 MAPKAPK2P49137 400 aa16.37■□□□□ 0.21
SNRPD3-201ENST00000215829 NDST2P52849 883 aa16.37■□□□□ 0.21
SNRPD3-201ENST00000215829 PPIDQ08752 370 aaKnown RBP16.37■□□□□ 0.21
SNRPD3-201ENST00000215829 AP1B1Q10567 949 aa16.37■□□□□ 0.21
SNRPD3-201ENST00000215829 HEATR6Q6AI08 1181 aaKnown RBP16.37■□□□□ 0.21
SNRPD3-201ENST00000215829 POTEHQ6S545 545 aa16.37■□□□□ 0.21
SNRPD3-201ENST00000215829 HTR3CQ8WXA8 447 aa16.37■□□□□ 0.21
SNRPD3-201ENST00000215829 ING5Q8WYH8 240 aa16.37■□□□□ 0.21
SNRPD3-201ENST00000215829 PRICKLE1Q96MT3 831 aaPredicted RBP16.37■□□□□ 0.21
SNRPD3-201ENST00000215829 SLC39A8Q9C0K1 460 aa16.37■□□□□ 0.21
SNRPD3-201ENST00000215829 C2orf16Q68DN1 1984 aa16.37■□□□□ 0.21
SNRPD3-201ENST00000215829 GFRA2O00451 464 aa16.36■□□□□ 0.21
SNRPD3-201ENST00000215829 SCAMP3O14828 347 aaKnown RBP16.36■□□□□ 0.21
SNRPD3-201ENST00000215829 MYBL2P10244 700 aa16.36■□□□□ 0.21
SNRPD3-201ENST00000215829 VAV1P15498 845 aa16.36■□□□□ 0.21
SNRPD3-201ENST00000215829 HOXB8P17481 243 aaPredicted RBP16.36■□□□□ 0.21
SNRPD3-201ENST00000215829 ITIH2P19823 946 aa16.36■□□□□ 0.21
SNRPD3-201ENST00000215829 WEE1P30291 646 aa16.36■□□□□ 0.21
SNRPD3-201ENST00000215829 OR1E1P30953 314 aa16.36■□□□□ 0.21
SNRPD3-201ENST00000215829 RPL22P35268 128 aaKnown RBP16.36■□□□□ 0.21
SNRPD3-201ENST00000215829 VPS41P49754 854 aa16.36■□□□□ 0.21
SNRPD3-201ENST00000215829 CDH4P55283 916 aa16.36■□□□□ 0.21
SNRPD3-201ENST00000215829 RPS24P62847 133 aaKnown RBP16.36■□□□□ 0.21
SNRPD3-201ENST00000215829 ZNF33AQ06730 810 aa16.36■□□□□ 0.21
SNRPD3-201ENST00000215829 CBX2Q14781 532 aaPredicted RBP16.36■□□□□ 0.21
SNRPD3-201ENST00000215829 GRIN2CQ14957 1233 aa16.36■□□□□ 0.21
SNRPD3-201ENST00000215829 P3H1Q32P28 736 aa16.36■□□□□ 0.21
SNRPD3-201ENST00000215829 TTC39BQ5VTQ0 682 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms