RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 SLC2A3P11169 496 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 MTA1Q13330 715 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 PDCLQ13371 301 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 CDH18Q13634 790 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 TEAD4Q15561 434 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 KIF19Q2TAC6 998 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 CACUL1Q86Y37 369 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 CCDC117Q8IWD4 279 aaPredicted RBP16.42■□□□□ 0.22
ERCC1-201ENST00000013807 CFAP52Q8N1V2 620 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 CARNMT1Q8N4J0 409 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 ADAM32Q8TC27 787 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 SHC3Q92529 594 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 IGSF8Q969P0 613 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 SLC2A13Q96QE2 648 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 FAM129BQ96TA1 746 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 ACP6Q9NPH0 428 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 APEX2Q9UBZ4 518 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 XPO7Q9UIA9 1087 aaKnown RBP16.42■□□□□ 0.22
ERCC1-201ENST00000013807 FZD4Q9ULV1 537 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 APOBEC2Q9Y235 224 aaKnown RBP16.42■□□□□ 0.22
ERCC1-201ENST00000013807 NCKAP1Q9Y2A7 1128 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 ANKRD6Q9Y2G4 727 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 APC2O95996 2303 aa16.42■□□□□ 0.22
ERCC1-201ENST00000013807 NBEAQ8NFP9 2946 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 EDDM13A0A1B0GTR0 161 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 SRRM3A6NNA2 597 aaPredicted RBP16.41■□□□□ 0.22
ERCC1-201ENST00000013807 THAP12O43422 761 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 PCDHGA12O60330 932 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 DFNA5O60443 496 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 RNASEH1O60930 286 aaKnown RBP16.41■□□□□ 0.22
ERCC1-201ENST00000013807 MOCS3O95396 460 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 SLC9A1P19634 815 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 TACR2P21452 398 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 GALCP54803 685 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 ECT2LQ008S8 904 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 SUZ12Q15022 739 aaKnown RBP16.41■□□□□ 0.22
ERCC1-201ENST00000013807 CST6Q15828 149 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 ZC3H12AQ5D1E8 599 aaKnown RBP16.41■□□□□ 0.22
ERCC1-201ENST00000013807 EFHC1Q5JVL4 640 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 TTC39BQ5VTQ0 682 aaPredicted RBP16.41■□□□□ 0.22
ERCC1-201ENST00000013807 GBP6Q6ZN66 633 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 MMS22LQ6ZRQ5 1243 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 SLCO6A1Q86UG4 719 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 PTPRN2Q92932 1015 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 FAM131CQ96AQ9 280 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 CDC6Q99741 560 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 MTG2Q9H4K7 406 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 TOR4AQ9NXH8 423 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 FBXL12Q9NXK8 326 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 TPX2Q9ULW0 747 aaKnown RBP16.41■□□□□ 0.22
ERCC1-201ENST00000013807 ITPR1Q14643 2758 aa16.41■□□□□ 0.22
ERCC1-201ENST00000013807 CACNA1GO43497 2377 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 A0A1W2PPC4 97 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 PON1P27169 355 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 CTSKP43235 329 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 OXCT1P55809 520 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 RACK1P63244 317 aaKnown RBP16.4■□□□□ 0.22
ERCC1-201ENST00000013807 PITX1P78337 314 aaPredicted RBP16.4■□□□□ 0.22
ERCC1-201ENST00000013807 SULT2A1Q06520 285 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 TAF5Q15542 800 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 KIAA0895LQ68EN5 471 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 CCNI2Q6ZMN8 369 aaPredicted RBP16.4■□□□□ 0.22
ERCC1-201ENST00000013807 APCDD1Q8J025 514 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 LGI2Q8N0V4 545 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 ATP6V0D2Q8N8Y2 350 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 ZCCHC14Q8WYQ9 949 aaKnown RBP16.4■□□□□ 0.22
ERCC1-201ENST00000013807 CPXM1Q96SM3 734 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 CRACR2AQ9BSW2 395 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 TJP2Q9UDY2 1190 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 SERGEFQ9UGK8 458 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 SLC12A6Q9UHW9 1150 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 SLCO3A1Q9UIG8 710 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 SNX11Q9Y5W9 270 aa16.4■□□□□ 0.22
ERCC1-201ENST00000013807 CHD5Q8TDI0 1954 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 TTC34A8MYJ7 566 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 VILLO15195 856 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 HSF2BPO75031 334 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 MOCS2O96007 188 aaPredicted RBP16.39■□□□□ 0.21
ERCC1-201ENST00000013807 PRKCSHP14314 528 aaPredicted RBP16.39■□□□□ 0.21
ERCC1-201ENST00000013807 C5AR1P21730 350 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 CCR1P32246 355 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 CTSOP43234 321 aaPredicted RBP16.39■□□□□ 0.21
ERCC1-201ENST00000013807 CCR5P51681 352 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 UBE2HP62256 183 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 CDK17Q00537 523 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 EXOC3L4Q17RC7 722 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 C5orf22Q49AR2 442 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 RAP1GAP2Q684P5 730 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 GJB7Q6PEY0 223 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 CHSY1Q86X52 802 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 DHX40Q8IX18 779 aaKnown RBP16.39■□□□□ 0.21
ERCC1-201ENST00000013807 MLKLQ8NB16 471 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 ZNF397Q8NF99 534 aaPredicted RBP16.39■□□□□ 0.21
ERCC1-201ENST00000013807 SETD7Q8WTS6 366 aaKnown RBP16.39■□□□□ 0.21
ERCC1-201ENST00000013807 SNX19Q92543 992 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 ALG14Q96F25 216 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 PPP1R13BQ96KQ4 1090 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 NEUROG2Q9H2A3 272 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 ADAMTS20P59510 1910 aa16.39■□□□□ 0.21
ERCC1-201ENST00000013807 LAMA5O15230 3695 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms