RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 SNX32Q86XE0 403 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 NCSTNQ92542 709 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 CDRT15Q96T59 188 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 GCOM2Q9BZD3 368 aaPredicted RBP14.37□□□□□ -0.11
USH1C-201ENST00000005226 UNKQ9C0B0 810 aaKnown RBP14.37□□□□□ -0.11
USH1C-201ENST00000005226 APPL1Q9UKG1 709 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 ARHGAP26Q9UNA1 814 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 GINS2Q9Y248 185 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 PABPC4LP0CB38 370 aaKnown RBP14.37□□□□□ -0.11
USH1C-201ENST00000005226 GRK2P25098 689 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 MTTPP55157 894 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 EPGNQ6UW88 154 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 SESTD1Q86VW0 696 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 GALNT4Q8N4A0 578 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.37□□□□□ -0.11
USH1C-201ENST00000005226 ACMSDQ8TDX5 336 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 ZNF669Q96BR6 464 aaPredicted RBP14.37□□□□□ -0.11
USH1C-201ENST00000005226 KLRG1Q96E93 195 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 DCUN1D1Q96GG9 259 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 CDH19Q9H159 772 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 SCN1AP35498 2009 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 CCDC160A6NGH7 325 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 ATP5BP06576 529 aaKnown RBP14.36□□□□□ -0.11
USH1C-201ENST00000005226 SMIM18P0DKX4 95 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 INSRRP14616 1297 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 TPH1P17752 444 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 PGAM1P18669 254 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 XRCC1P18887 633 aaPredicted RBP14.36□□□□□ -0.11
USH1C-201ENST00000005226 TCN1P20061 433 aaPredicted RBP14.36□□□□□ -0.11
USH1C-201ENST00000005226 HMGB2P26583 209 aaKnown RBP14.36□□□□□ -0.11
USH1C-201ENST00000005226 FDFT1P37268 417 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 RABGGTBP53611 331 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 DEUP1Q05D60 604 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 DYNC1I2Q13409 638 aaKnown RBP14.36□□□□□ -0.11
USH1C-201ENST00000005226 TTLL12Q14166 644 aaPredicted RBP14.36□□□□□ -0.11
USH1C-201ENST00000005226 FSTL4Q6MZW2 842 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 LBX2Q6XYB7 198 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 PID1Q7Z2X4 250 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 TDRD5Q8NAT2 981 aaKnown RBP14.36□□□□□ -0.11
USH1C-201ENST00000005226 FAM156AQ8NDB6 213 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 C18orf25Q96B23 403 aaPredicted RBP14.36□□□□□ -0.11
USH1C-201ENST00000005226 MPP4Q96JB8 637 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 CNBD2Q96M20 576 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 COPS7BQ9H9Q2 264 aaPredicted RBP14.36□□□□□ -0.11
USH1C-201ENST00000005226 G3V2L1 256 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 LMO2P25791 158 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 THOP1P52888 689 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 MS4A2Q01362 244 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 GRM2Q14416 872 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 SLC5A9Q2M3M2 681 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 HSP90AA5PQ58FG0 334 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 STXBP5Q5T5C0 1151 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 RBM44Q6ZP01 1051 aaKnown RBP14.36□□□□□ -0.11
USH1C-201ENST00000005226 ZNF567Q8N184 647 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 CERS2Q96G23 380 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 ZMAT2Q96NC0 199 aaKnown RBP14.36□□□□□ -0.11
USH1C-201ENST00000005226 OLFM3Q96PB7 478 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 VCX3BQ9H321 246 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 PRDM12Q9H4Q4 367 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 VRTNQ9H8Y1 702 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 VCX3AQ9NNX9 186 aa14.36□□□□□ -0.11
USH1C-201ENST00000005226 PRMT7Q9NVM4 692 aaPredicted RBP14.36□□□□□ -0.11
USH1C-201ENST00000005226 A0A096LPK6 155 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 A0A1B0GTW7 788 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 ATP9BO43861 1147 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 FBXO21O94952 628 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 PYGLP06737 847 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 MCF2P10911 925 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 MX2P20592 715 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 PIK3R1P27986 724 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 GP5P40197 560 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 RANBP1P43487 201 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 GLRBP48167 497 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 SNAPC2Q13487 334 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 ZNF618Q5T7W0 954 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 FAM219BQ5XKK7 198 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 MFSD3Q96ES6 412 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 HAPLN3Q96S86 360 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 SIKE1Q9BRV8 207 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 GATA5Q9BWX5 397 aaPredicted RBP14.35□□□□□ -0.11
USH1C-201ENST00000005226 ASB7Q9H672 318 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 MORF4L1Q9UBU8 362 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 TUBGCP4Q9UGJ1 667 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 PCDHB12Q9Y5F1 795 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 DNAJA2O60884 412 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 C22orf31O95567 290 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 JUNP05412 331 aaKnown RBP14.35□□□□□ -0.11
USH1C-201ENST00000005226 TGFB3P10600 412 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 ENO3P13929 434 aaPredicted RBP14.35□□□□□ -0.11
USH1C-201ENST00000005226 ALOX15P16050 662 aaPredicted RBP14.35□□□□□ -0.11
USH1C-201ENST00000005226 CERCAMQ5T4B2 595 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 C6orf52Q5T4I8 152 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 SDCCAG8Q86SQ7 713 aaPredicted RBP14.35□□□□□ -0.11
USH1C-201ENST00000005226 PQLC1Q8N2U9 271 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 JADE3Q92613 823 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 FAM149B1Q96BN6 582 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 NUF2Q9BZD4 464 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 SPATC1LQ9H0A9 340 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 STN1Q9H668 368 aaKnown RBP14.35□□□□□ -0.11
USH1C-201ENST00000005226 TCF7L2Q9NQB0 619 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms