RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Slc39a3Q99K24 317 aa13.54□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Tll2Q9WVM6 1012 aa13.54□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Col1a1P11087 1453 aa13.54□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Gm5737A0A140LI11 423 aa13.54□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Hnrnph2P70333 449 aaKnown RBP13.54□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Cdk7Q03147 346 aa13.54□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Glt8d2Q640P4 349 aa13.54□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Atg16l2Q6KAU8 623 aa13.54□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Smarcal1Q8BJL0 910 aa13.54□□□□□ -0.24
Rnf40-202ENSMUST00000205694 PstkQ8BP74 359 aa13.54□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Thop1Q8C1A5 687 aaKnown RBP13.54□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Cd300ldQ8VCH2 221 aa13.54□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Sirt2Q8VDQ8 389 aa13.54□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Gins4Q99LZ3 223 aa13.54□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Txndc12Q9CQU0 170 aa13.54□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Znf609Q8BZ47 1413 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Xlr5bA2BI50 236 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Nipsnap3aB1AWZ3 247 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Scgb2b7D3YYY1 112 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 ClockO08785 855 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 MyrfQ3UR85 1138 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Lrrc55Q3UY51 311 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 ChpfQ6IQX7 774 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 DgkqQ6P5E8 934 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Dlgap3Q6PFD5 977 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Rnf135Q9CWS1 417 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Pbld2Q9CXN7 288 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Sstr1P30873 391 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Pola2P33611 600 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 AcadmP45952 421 aaKnown RBP13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Dph1Q5NCQ5 438 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Klhdc10Q6PAR0 439 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Ppp1r11Q8K1L5 131 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 PolbQ8K409 335 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Tmprss4Q8VCA5 435 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Nrif2Q921B4 824 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Smad9Q9JIW5 430 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 1700017N19RikA0A087WPJ1 469 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Smim10l2aA0A0B4J1F8 78 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Fam47eD3YWC7 402 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Klrk1O54709 232 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Hsd17b7O88736 334 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Mov10P23249 1004 aaKnown RBP13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 1700061G19RikQ08EE8 705 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Arhgap45Q3TBD2 1116 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Togaram2Q3TYG6 1002 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Slc10a5Q5PT54 434 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Tshz2Q68FE9 1030 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Guca1bQ8VBV8 201 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Gramd1aQ8VEF1 722 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Klhl35Q9CZ49 574 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Pld1Q9Z280 1074 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Pds5aQ6A026 1332 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Myh1Q5SX40 1942 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Lrrc73B2RWC4 316 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 TpteG5E8H5 664 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Vmn2r31L7N1Z4 861 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Rfx2P48379 717 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Gm5431Q5NCB3 844 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Fam126bQ8C729 530 aa13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 HnrnplQ8R081 586 aaKnown RBP13.53□□□□□ -0.24
Rnf40-202ENSMUST00000205694 PigrO70570 771 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Mtnd2P03893 345 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 CfhP06909 1234 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Atp5bP56480 529 aaKnown RBP13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Plk1Q07832 603 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Grid2ipQ0QWG9 1203 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Ccdc61Q3UJV1 511 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Mtnr1aQ61184 353 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Plppr4Q7TME0 766 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Tmcc2Q80W04 706 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Ccdc32Q8BS39 179 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Olfr589Q8VGV8 317 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Lrrc71Q9D3W5 558 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Tfr2Q9JKX3 798 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Cd151O35566 253 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Cdh16O88338 830 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Pnpla5Q32LZ8 432 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Shcbp1lQ3TTP0 639 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 HadhQ61425 314 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Fam126aQ6P9N1 521 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Klhl31Q8BWA5 634 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Idh3bQ91VA7 384 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Chchd6Q91VN4 273 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Crtc3Q91X84 619 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Eps8l2Q99K30 729 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Edf1Q9JMG1 148 aaKnown RBP13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Scnn1bQ9WU38 638 aa13.52□□□□□ -0.24
Rnf40-202ENSMUST00000205694 RxraP28700 467 aa13.52□□□□□ -0.25
Rnf40-202ENSMUST00000205694 Tmprss15P97435 1069 aa13.52□□□□□ -0.25
Rnf40-202ENSMUST00000205694 Alkbh5Q3TSG4 395 aaKnown RBP13.52□□□□□ -0.25
Rnf40-202ENSMUST00000205694 Zfp217Q3U0X6 1041 aa13.52□□□□□ -0.25
Rnf40-202ENSMUST00000205694 Ndst1Q3UHN9 882 aa13.52□□□□□ -0.25
Rnf40-202ENSMUST00000205694 Zfp957Q3UT76 567 aa13.52□□□□□ -0.25
Rnf40-202ENSMUST00000205694 VwdeQ6DFV8 926 aa13.52□□□□□ -0.25
Rnf40-202ENSMUST00000205694 PapolgQ6PCL9 739 aa13.52□□□□□ -0.25
Rnf40-202ENSMUST00000205694 Kcnt1Q6ZPR4 1224 aa13.52□□□□□ -0.25
Rnf40-202ENSMUST00000205694 Eif2s1Q6ZWX6 315 aaKnown RBP13.52□□□□□ -0.25
Rnf40-202ENSMUST00000205694 TbcdQ8BYA0 1196 aa13.52□□□□□ -0.25
Rnf40-202ENSMUST00000205694 Kdm4bQ91VY5 1086 aa13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms