RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 CopaQ8CIE6 1224 aaKnown RBP17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Pcdha5Q91Y15 934 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Sike1Q9CPR7 207 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Borcs6Q9D6W8 360 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Pou5f2Q9DAC9 329 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Pabpc1P29341 636 aaKnown RBP17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Ptpn1P35821 432 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Grm2Q14BI2 872 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Tcf4Q60722 670 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Cdc42bpaQ3UU96 1719 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Chst3O88199 472 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Pi4k2aQ2TBE6 479 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 GnasQ6R0H7 1133 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Olfr866Q8VFI7 312 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 AasdhpptQ9CQF6 309 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Slfn9B1ARD6 910 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Slc4a5E9Q3M5 1116 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Vmn2r38G3UYA8 861 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Vmn2r33K7N705 861 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Vmn2r44L7N2E1 861 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 C1dO35473 141 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Rrp36Q3UFY0 244 aaKnown RBP17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Tmem199Q5SYH2 208 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Nemp1Q6ZQE4 437 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Sfr1Q8BP27 319 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Stx5Q8K1E0 355 aa17.06■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Wscd2D4PHA7 571 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Cyp2b23E9Q593 491 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 TankP70347 448 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Phlda1Q62392 405 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Krt42Q6IFX2 452 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Slx1bQ8BX32 270 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Ttc39cQ8VE09 580 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Mrpl46Q9EQI8 283 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Msh5Q9QUM7 833 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 F830016B08RikG3UWE2 416 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Mrpl10Q3TBW2 262 aaKnown RBP17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Sf1Q64213 653 aaKnown RBP17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Lrig3Q6P1C6 1117 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Exd2Q8VEG4 650 aaKnown RBP17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Gm21488A0A087WR99 222 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Cxcr3O88410 367 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Akr1b7P21300 316 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Cyp2d10P24456 504 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Dlg4Q62108 724 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Rnf135Q9CWS1 417 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Rrm2P11157 390 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 PorP37040 678 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Ubiad1Q9DC60 336 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Tjp2Q9Z0U1 1167 aaKnown RBP17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Aldh1a7O35945 501 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Mmp10O55123 476 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Aldh1a1P24549 501 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Nlrc4Q3UP24 1024 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Mtnr1aQ61184 353 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Dpysl3Q62188 570 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 LnpepQ8C129 1025 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Fam126bQ8C729 530 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Klhl35Q9CZ49 574 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Duoxa2Q9D311 320 aa17.05■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Klhl3E0CZ16 587 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 SykP48025 629 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Magee1Q6PCZ4 918 aaKnown RBP17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Slc41a1Q8BJA2 512 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Hsdl1Q8BTX9 330 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Smim11aQ99J19 55 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Ppil2Q9D787 521 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Irs2P81122 1321 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Prdm12A2AJ77 365 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Rexo5D3YW29 759 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Irf8P23611 424 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 WlsQ6DID7 541 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Wscd1Q80XH4 572 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Ptpn7Q8BUM3 359 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Pfdn1Q9CWM4 122 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Arhgef28P97433 1693 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 1600015I10RikE9Q745 711 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Ctbp1O88712 441 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Elk3P41971 409 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Lad1P57016 528 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Fam20bQ8VCS3 409 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Dkk3Q9QUN9 349 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 DgkeQ9R1C6 564 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Ror1Q9Z139 937 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Gm8369E9PZI3 166 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Hoxb8P09632 243 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Ncam1P13595 1115 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Alkbh5Q3TSG4 395 aaKnown RBP17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Smpd4Q6ZPR5 823 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 4931406P16RikQ8C5X1 1059 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Slc5a3Q9JKZ2 718 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Adam18Q9R157 719 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Cyp2b13A6H6J2 491 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Pabpc5Q8C7D3 381 aaKnown RBP17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Wdsub1Q9D0I6 474 aa17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Mrto4Q9D0I8 239 aaKnown RBP17.04■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Tcea1P10711 301 aaKnown RBP17.03■□□□□ 0.32
Shroom3-201ENSMUST00000113051 ItgavP43406 1044 aa17.03■□□□□ 0.32
Shroom3-201ENSMUST00000113051 AdssP46664 456 aa17.03■□□□□ 0.32
Shroom3-201ENSMUST00000113051 Phactr1Q2M3X8 580 aa17.03■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms