RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Gpr162Q3UN16 588 aa18.72■□□□□ 0.59
Trim71-201ENSMUST00000111816 Cbx5Q61686 191 aaKnown RBP18.72■□□□□ 0.59
Trim71-201ENSMUST00000111816 Mospd1Q8VEL0 213 aa18.72■□□□□ 0.59
Trim71-201ENSMUST00000111816 Nrf1Q9WU00 503 aa18.72■□□□□ 0.59
Trim71-201ENSMUST00000111816 Naaladl2A0A0N4SUJ3 795 aa18.72■□□□□ 0.59
Trim71-201ENSMUST00000111816 Gm4131A0A140LJ24 318 aa18.72■□□□□ 0.59
Trim71-201ENSMUST00000111816 Sptlc1O35704 473 aa18.72■□□□□ 0.59
Trim71-201ENSMUST00000111816 Chrna5Q2MKA5 467 aa18.72■□□□□ 0.59
Trim71-201ENSMUST00000111816 Proser1Q5PRE5 913 aa18.72■□□□□ 0.59
Trim71-201ENSMUST00000111816 Calm5Q6W3E0 140 aa18.72■□□□□ 0.59
Trim71-201ENSMUST00000111816 Nphs2Q91X05 385 aa18.72■□□□□ 0.59
Trim71-201ENSMUST00000111816 Asah2Q9JHE3 756 aa18.72■□□□□ 0.59
Trim71-201ENSMUST00000111816 Bmp15Q9Z0L4 392 aa18.72■□□□□ 0.59
Trim71-201ENSMUST00000111816 Dennd4bQ3U1Y4 1499 aa18.72■□□□□ 0.59
Trim71-201ENSMUST00000111816 Ccdc88aQ5SNZ0 1873 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Zmym5Q3U2E2 627 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Efhc1Q9D9T8 648 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Aldh6a1Q9EQ20 535 aaKnown RBP18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Wdr61Q9ERF3 305 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Zscan4-ps3A0A1B0GRH6 506 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Zscan4-ps2A0A1C7CYU6 506 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Ddr1Q03146 911 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Hk3Q3TRM8 922 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Carmil2Q3V3V9 1296 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Tex22Q9D9U4 189 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Kif14L0N7N1 1674 aaKnown RBP18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Abca8bQ8K440 1620 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 PtproE9Q612 1226 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Gm8871F7AXK2 190 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Pax3P24610 479 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Fam83fQ3UKU4 495 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Nt5c2Q3V1L4 560 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Tspan18Q80WR1 248 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Trmt13Q8BYH3 481 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 TiparpQ8C1B2 657 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Bhlhe22Q8C6A8 355 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Hist1h2aaQ8CGP4 129 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Ace2Q8R0I0 805 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Olfr805Q8VFI4 319 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Tc2nQ91XT6 489 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Camk1Q91YS8 374 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Hddc3Q9D114 179 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Tcf12Q61286 706 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Smtnl2Q8CI12 456 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Mta1Q8K4B0 715 aaKnown RBP18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Eps8l2Q99K30 729 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Limd1Q9QXD8 668 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Gm21897J3KMP5 500 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Gm21750L7N228 499 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Rps6kl1Q8R2S1 544 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Vps35Q9EQH3 796 aaKnown RBP18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Chrna6Q9R0W9 494 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Btnl6A2CG22 539 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Fbxo40P62932 710 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Grin2cQ01098 1239 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Frmd6Q8C0V9 622 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 SucoQ8C341 1250 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Snx8Q8CFD4 459 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Olfr330Q8VGD9 315 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Scnn1bQ9WU38 638 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Myo7aP97479 2215 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Mcpt1P11034 246 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Clk1P22518 483 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Pacs1Q8K212 961 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Slc34a2Q9DBP0 697 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Katna1Q9WV86 491 aa18.71■□□□□ 0.59
Trim71-201ENSMUST00000111816 Ppm1bP36993 390 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 GsapQ3TCV3 858 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Zcchc4Q8BKW4 512 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Znf207Q9JMD0 495 aaKnown RBP18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Nfx1B1AY10 1114 aaKnown RBP18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Awat2Q6E1M8 333 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 BC061212Q6P8K3 481 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Tlr12Q6QNU9 906 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Ccdc142Q8CAI1 738 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Fbxo43Q8CDI2 640 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Kpna7C0LLJ0 499 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Gm6811E9Q3Y8 510 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Alppl2P24823 529 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Vmn1r209Q5NC97 312 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Prl2c1Q5SVL9 228 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Ptpn7Q8BUM3 359 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Gosr2O35166 212 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Birc5O70201 140 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Vav1P27870 845 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 AcadsbQ9DBL1 432 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Cdc42bpgQ80UW5 1551 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Tbc1d25A1A5B6 742 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Fam131cA2ADB2 273 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Il4i1O09046 630 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 PamP97467 979 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Uchl1Q9R0P9 223 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Bbip1J3QMK2 67 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 NsmafO35242 920 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Wdr75Q3U821 830 aaKnown RBP18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 BB287469Q3UT53 144 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Cpsf4Q8BQZ5 211 aaKnown RBP18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Mab21L3Q8CI17 429 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 StrbpQ91WM1 672 aaKnown RBP18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Rars2Q3U186 578 aa18.7■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms