RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Hspbap1Q8BK58 483 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Pak5Q8C015 719 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Tmx4Q8C0L0 335 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Pdik1lQ8QZR7 341 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Pcdhgb1Q91XX8 918 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Pcdhb18Q91Y02 792 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Syde1Q9DBZ9 737 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 PrccQ9EQC8 491 aaKnown RBP23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Fam171a1A2ATK9 892 aa23.3■■□□□ 1.32
Scn1b-201ENSMUST00000098548 9230113P08RikD3YWX3 137 aa23.3■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Vmn2r39L7N2E5 861 aa23.3■■□□□ 1.32
Scn1b-201ENSMUST00000098548 GsrP47791 500 aa23.3■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Kcnn2P58390 839 aa23.3■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Casp4P70343 373 aa23.3■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Cdh9P70407 786 aa23.3■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Znf112Q0VAW7 879 aa23.3■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Q8BWG4 1187 aa23.3■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Nipal4Q8BZF2 406 aa23.3■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Acad9Q8JZN5 625 aaKnown RBP23.3■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Rtn4rl1Q8K0S5 445 aa23.3■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Rell1Q8K2J7 272 aa23.3■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Evi2bQ8VD58 444 aa23.3■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Dlg2Q91XM9 852 aa23.3■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Slc39a3Q99K24 317 aa23.3■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Gm8113E0CXS8 587 aa23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Ccdc188F6WEU2 249 aa23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Atxn1lP0C7T6 687 aa23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Dynlt1P51807 113 aa23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Apobec1P51908 229 aaKnown RBP23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 PrlrQ08501 608 aa23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 AcdQ5EE38 416 aa23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Igfbp7Q61581 281 aa23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Ssr4Q62186 172 aa23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Nuak1Q641K5 658 aa23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 RbakQ8BQC8 711 aa23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Unc45aQ99KD5 944 aa23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Abcg3Q99P81 650 aa23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 IkbkeQ9R0T8 717 aa23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Phf2Q9WTU0 1096 aa23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Stat2Q9WVL2 923 aa23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Slc23a1Q9Z2J0 605 aa23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Cep290Q6A078 2472 aa23.29■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Gm9774A0A0A6YVU8 407 aa23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Lcn6A2AJB9 181 aa23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Serpine3E9Q6A2 401 aa23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Srsf11E9Q6E5 511 aaKnown RBP23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Gpr3P35413 330 aa23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 MagohP61327 146 aaKnown RBP23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Irx1P81068 480 aa23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Psg28Q4KL66 472 aa23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Aldh1a2Q62148 518 aa23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Zic5Q7TQ40 622 aa23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Olfr1198Q7TR12 308 aa23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 DrgxQ8BYH0 263 aa23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Spag16Q8K450 639 aa23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 MagohbQ9CQL1 146 aa23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 MrgbpQ9DAT2 204 aa23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Kifc1Q9QWT9 674 aa23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Golga5Q9QYE6 729 aa23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Trpc7Q9WVC5 862 aa23.28■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Wdr95D3Z7A8 784 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Zc3h12bG3X9I7 835 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Tmprss9P69525 1065 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 AcrbpQ3V140 540 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Dll1Q61483 722 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Fnip2Q80TD3 1108 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Pdk1Q8BFP9 434 aaKnown RBP23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Iffo1Q8BXL9 562 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 PmpcbQ9CXT8 489 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Capns2Q9D7J7 247 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Ankfn1A0A140LIW7 1083 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Arhgef37A1IGU4 676 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Patl2A2ARM1 529 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Gm11758A2BEI6 360 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Gm11757A2BEI8 360 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Grip2G3XA20 1042 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 SykP48025 629 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Sycp3P70281 254 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Sox9Q04887 507 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Nt5dc3Q3UHB1 546 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Frem3Q5H8B9 2123 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Slc6a4Q60857 630 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Msi1Q61474 362 aaKnown RBP23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Ccdc154Q6RUT8 657 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Olfr1080Q7TR67 313 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Wnk4Q80UE6 1222 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Mis18bp1Q80WQ8 998 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Stx16Q8BVI5 326 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Q8C4P0 716 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Samd7Q8C8Y5 445 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Wrnip1Q91XU0 660 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Gps1Q99LD4 471 aaKnown RBP23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Rmdn1Q9DCV4 305 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Cwc15Q9JHS9 229 aaKnown RBP23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 PolhQ9JJN0 694 aa23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 PnkpQ9JLV6 522 aaKnown RBP23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 QkiQ9QYS9 341 aaKnown RBP23.27■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Vmn2r59E9PUT5 865 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Gm21962L7N280 338 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Casq2O09161 415 aa23.26■■□□□ 1.31
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms