RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Mdh1P14152 334 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 E2f2P56931 443 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ybx1P62960 322 aaKnown RBP10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Itga4Q00651 1039 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Zfp217Q3U0X6 1041 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Foxr1Q3UTB7 268 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ephx3Q3V1F8 367 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ccdc85bQ6PDY0 202 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Naif1Q6PFD7 327 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Pnpla2Q8BJ56 486 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Eif2aQ8BJW6 581 aaKnown RBP10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gsto2Q8K2Q2 248 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Sec63Q8VHE0 760 aaKnown RBP10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Q9D937 123 aaKnown RBP10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Snx1Q9WV80 522 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Scgb2b12S4R2L0 112 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Per3O70361 1113 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gjb5Q02739 271 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Mcm9Q2KHI9 1134 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 ZufspQ3T9Z9 577 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gm13103Q4VAD2 491 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ccdc92bQ5SUE3 299 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ccdc154Q6RUT8 657 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Dpy19l3Q71B07 716 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Zbtb41Q811F1 908 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Polr3cQ9D483 533 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Magel2Q9QZ04 1284 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 TfebQ9R210 475 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Nme3Q9WV85 169 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 MaptP10637 733 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Msx3P70354 204 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Vps45P97390 570 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Pla2g4dQ50L43 825 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gpr17Q6NS65 339 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Rxfp1Q6R6I7 758 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 MroQ7TNB4 248 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Q8BGC1 442 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Smoc1Q8BLY1 463 aaKnown RBP10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Rtn4rl1Q8K0S5 445 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 HpdlQ8K248 371 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Wnt9aQ8R5M2 365 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Lpin1Q91ZP3 924 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Sfxn1Q99JR1 322 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 March2Q99M02 246 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Rwdd4Q9CPR1 188 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Creld2Q9CYA0 350 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 4930578G10RikQ9D4Q4 153 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Cyp4v2Q9DBW0 525 aa10.2□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Iqcj-Schip1A0A088MLT8 559 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 BC024978J3QPC3 361 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ap3d1O54774 1199 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Mllt10O54826 1068 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Schip1P0DPB4 484 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Slc6a13P31649 602 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 CenpcP49452 906 aaKnown RBP10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Rab6bP61294 208 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Atp13a5Q3TYU2 1216 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Wee2Q66JT0 555 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Pdk1Q8BFP9 434 aaKnown RBP10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ddx1Q91VR5 740 aaKnown RBP10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Alg14Q9D081 217 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Iqcf1Q9D9K8 182 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Fam43bA2AM80 330 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Rad51ap2G3UW63 976 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Exoc7O35250 697 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 TshrP47750 764 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Dbx1P52950 335 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Fgf13P70377 245 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 RnaselQ05921 735 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Fam47cQ14BE7 430 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ccdc110Q3V125 848 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Creb3Q61817 404 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Syn2Q64332 586 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 CtifQ6PEE2 600 aaKnown RBP10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Nipal4Q8BZF2 406 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Spata16Q8C636 571 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Sh2b1Q91ZM2 756 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Cog2Q921L5 731 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Mfsd5Q921Y4 450 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Cdc26Q99JP4 85 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Bzw1Q9CQC6 419 aaKnown RBP10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 4930449I24RikQ9D5E3 319 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 NbnQ9R207 751 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 SpaarA0A1B0GSZ0 75 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 IqccA2ADZ8 418 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Dcpp2E9PYC2 171 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Dcpp1L7N1X9 171 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Vmn2r39L7N2E5 861 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 CremP27699 357 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Slc16a1P53986 493 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Smad1P70340 465 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Neurog1P70660 244 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Fmo3P97501 534 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Emc10Q3TAS6 258 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Zmym1Q3TJB1 983 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Pyroxd1Q3TMV7 498 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gm4952Q5FW57 296 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Foxd4Q60688 444 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 PapolaQ61183 739 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ssr4Q62186 172 aa10.19□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms