RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 SpibO35906 267 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Rdh7O88451 316 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Akap10O88845 662 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Scd1P13516 355 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Lmo2P25801 158 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Irf3P70671 419 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Lrrc8eQ66JT1 795 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Znf821Q6PD05 413 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tbx10Q810F8 385 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 ClmnQ8C5W0 1052 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Kctd12bQ8C7J6 292 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ccdc28bQ8CEG5 200 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Trim32Q8CH72 655 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Hip1Q8VD75 1029 aaKnown RBP9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Slc25a3Q8VEM8 357 aaKnown RBP9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Creld1Q91XD7 420 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Lpin1Q91ZP3 924 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Mcrs1Q99L90 462 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tnfaip8l2Q9D8Y7 184 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Q9D9D9 101 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Pgam1Q9DBJ1 254 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 PolhQ9JJN0 694 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ly75Q60767 1723 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Mcf2A2AEU1 1111 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ccdc62E9PVD1 701 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Vmn1r39G3UWE6 305 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Cyp2j12G3UXT0 502 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Vmn2r19G5E8G4 854 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 JchainP01592 159 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Man1a1P45700 655 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ythdf1P59326 559 aaKnown RBP9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Lpar1P61793 364 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Akr1c6P70694 323 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Sephs2P97364 452 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Mgat3Q10470 538 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tmem237Q3V0J1 427 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gngt2Q61017 69 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Trim24Q64127 1051 aaKnown RBP9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tcaf3Q6QR59 914 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Klhl17Q6TDP3 640 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Olfr212Q7TS33 327 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Zbtb41Q811F1 908 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Nup93Q8BJ71 819 aaKnown RBP9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tdrd7Q8K1H1 1086 aaKnown RBP9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 ItpkaQ8R071 459 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Agr3Q8R3W7 165 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Serpina3nQ91WP6 418 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Pcdha1Q91Y21 948 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Pkp2Q9CQ73 795 aaKnown RBP9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Dusp21Q9D9D8 189 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 MrgbpQ9DAT2 204 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Noa1Q9JJG9 693 aaKnown RBP9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Cry2Q9R194 592 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Bscl2Q9Z2E9 383 aa9.94□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Klhl18A0A0G2JGN5 579 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Sh3pxd2bA2AAY5 908 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Cyp2b13A6H6J2 491 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ccdc144bE9PVZ3 520 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Olfr731F8VQB9 326 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Zfp105G3X9I0 524 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Slc1a6O35544 561 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 ThraP63058 492 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gm1604bQ3TRG0 118 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Snx27Q3UHD6 539 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Etaa1Q5SVT3 877 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 RgnQ64374 299 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Wee2Q66JT0 555 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Mbtd1Q6P5G3 631 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Abhd10Q6PE15 297 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Rad9bQ6WBX7 403 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Grik4Q8BMF5 956 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Rsl1d1Q8BVY0 452 aaKnown RBP9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tlk1Q8C0V0 766 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Mrpl47Q8K2Y7 252 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Olfr809Q8VEX8 328 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Itm2cQ91VK4 269 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ctu1Q99J10 420 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Chst12Q99LL3 419 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ssu72Q9CY97 194 aaKnown RBP9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ubxn11Q9D572 484 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Kctd4Q9D7X1 259 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 VirmaA2AIV2 1811 aaKnown RBP9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gm8444F6XS56 118 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 F6Y6L6 278 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Alas2P08680 587 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tlx1P43345 332 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Rpl5P47962 297 aaKnown RBP9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Proser1Q5PRE5 913 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Olfr8Q60892 310 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Fndc3bQ6NWW9 1207 aaKnown RBP9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tmem198Q8BG75 360 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Cdkn2aipQ8BI72 563 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Dis3lQ8C0S1 1053 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Washc5Q8C2E7 1159 aaKnown RBP9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Bhlhe22Q8C6A8 355 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Slc15a5Q8CBB2 566 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Vps39Q8R5L3 886 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Zfp566Q8VCI1 386 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Trim7Q923T7 510 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Poc5Q9DBS8 558 aa9.93□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms