RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 P3h1Q3V1T4 739 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Papd7Q6PB75 542 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 PapolgQ6PCL9 739 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Fbxo42Q6PDJ6 717 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tmem59Q9QY73 323 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Gm8906L7N2A2 181 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Zw10O54692 779 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 PrkcqQ02111 707 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Fnip1Q68FD7 1165 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Spata20Q80YT5 790 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Scara3Q8C850 606 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Fubp1Q91WJ8 651 aaKnown RBP12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Slc5a5Q99PN0 618 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Stap1Q9JM90 297 aaKnown RBP12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Kcnd2Q9Z0V2 630 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Hist1h2abC0HKE1 130 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Hist1h2acC0HKE2 130 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Hist1h2adC0HKE3 130 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Hist1h2aeC0HKE4 130 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Hist1h2agC0HKE5 130 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Hist1h2aiC0HKE6 130 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Hist1h2anC0HKE7 130 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Hist1h2aoC0HKE8 130 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Hist1h2apC0HKE9 130 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Rfpl4bJ3QPR6 266 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Vmn2r46L7N282 809 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Slc16a8O35308 492 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Fgfr1P16092 822 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Kcnj2P35561 428 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Muc1Q02496 630 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 TraddQ3U0V2 310 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Brip1Q5SXJ3 1174 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 PoliQ6R3M4 717 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Hist3h2aQ8BFU2 130 aaKnown RBP12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Hist1h2afQ8CGP5 130 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Hist1h2ahQ8CGP6 128 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Hist1h2akQ8CGP7 130 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 H2afjQ8R1M2 129 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Vwa1Q8R2Z5 415 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Dnajc14Q921R4 703 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Zfp61Q923D1 555 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Pin4Q9CWW6 131 aa12.16□□□□□ -0.46
Trim56-201ENSMUST00000054384 Btbd18A0A0A6YY25 723 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Gm13088A2AGW6 460 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ncf4P97369 339 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Cnot7Q60809 285 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Mtnr1aQ61184 353 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Mfn1Q811U4 741 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Brat1Q8C3R1 822 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Wdr11Q8K1X1 1223 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Bmpr2O35607 1038 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Rgs9O54828 675 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ifnl3Q8CGK6 193 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 MtpapQ9D0D3 585 aaKnown RBP12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ifi202Q9R002 445 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Gm7694J3QNH8 270 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 ChgbP16014 677 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Klra1P20937 262 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Zfp217Q3U0X6 1041 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Nlrc4Q3UP24 1024 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Thop1Q8C1A5 687 aaKnown RBP12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ube2q2Q8K2Z8 378 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Npm3Q9CPP0 175 aaKnown RBP12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Piwil1Q9JMB7 862 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Fads2Q9Z0R9 444 aaKnown RBP12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Nos2P29477 1144 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 PtpaP58389 323 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Adora2bQ60614 332 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Kctd3Q8BFX3 815 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 SgtaQ8BJU0 315 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tspan8Q8R3G9 235 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Cog2Q921L5 731 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Aldh6a1Q9EQ20 535 aaKnown RBP12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 PpieQ9QZH3 301 aaKnown RBP12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Nrf1Q9WU00 503 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Myh14Q6URW6 2000 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Wdr72D3YYM4 1114 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Vmn2r104E9Q2J5 860 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Dgcr6O35347 198 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Mdm4O35618 489 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Mars2Q499X9 586 aaKnown RBP12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ahcyl1Q80SW1 530 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tmc7Q8C428 726 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 AagabQ8R2R3 316 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Rnft1Q9DCN7 395 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Mta2Q9R190 668 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Gpatch2lQ6PE65 482 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Olfr330Q8VGD9 315 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 2610042L04RikQ9D073 150 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tex22Q9D9U4 189 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Rsph9Q9D9V4 276 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ddx20Q9JJY4 825 aaKnown RBP12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Arhgap33Q80YF9 1305 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Psmd7P26516 321 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Aars2Q14CH7 980 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Rnf44Q3UHJ8 407 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 AW551984Q8BGF0 804 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Nphs2Q91X05 385 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ndufb5Q9CQH3 189 aa12.15□□□□□ -0.46
Trim56-201ENSMUST00000054384 Egfl7Q9QXT5 275 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 51.7 ms