RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Pdia5Q921X9 517 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Fam212aQ9CX62 282 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Tssk3Q9D2E1 268 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Lrrc71Q9D3W5 558 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Ccdc103Q9D9P2 237 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Mrpl4Q9DCU6 294 aaKnown RBP8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Vwa7Q9JHA8 891 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Hey2Q9QUS4 339 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Dach1Q9QYB2 751 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 TfebQ9R210 475 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Gm3371F7CQW8 167 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Slc1a6O35544 561 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 C1qbP14106 253 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 PrkceP16054 737 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 NppbP40753 121 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Rpl10aP53026 217 aaKnown RBP8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Fitm2P59266 262 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Vars2Q3U2A8 1060 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Adrbk2Q3UYH7 688 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Zfp956Q3UZY6 572 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Ttc9Q3V038 219 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Chi3l1Q61362 389 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 LbpQ61805 481 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Catsper3Q80W99 395 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Zfp454Q80Y34 536 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Ccdc17Q8CE13 565 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 HscbQ8K3A0 234 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Mcoln2Q8K595 566 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Fam114a2Q8VE88 497 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Nxf1Q99JX7 618 aaKnown RBP8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Dpp3Q99KK7 738 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Zfp623Q9CY99 499 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 S100a14Q9D2Q8 104 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Gbe1Q9D6Y9 702 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Tubb3Q9ERD7 450 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Ccr10Q9JL21 362 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Hao2Q9NYQ2 353 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Trpc3Q9QZC1 836 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Phf11A6H5X4 337 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Gm3187M0QWW3 260 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Pole2O54956 527 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Hcn3O88705 779 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Ly9Q01965 654 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Gxylt1Q3UHH8 404 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Tfcp2l1Q3UNW5 479 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Znf148Q61624 794 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Jade1Q6ZPI0 834 aaKnown RBP8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Cand1Q6ZQ38 1230 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Znf12Q7TSI0 686 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Clec4a1Q80UI7 245 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Pcmtd2Q8BHD8 359 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Klhl38Q8BSF5 581 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Gpr20Q8BYC4 358 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Phactr3Q8BYK5 558 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Stard7Q8R1R3 373 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 NpntQ91V88 561 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 HnmtQ91VF2 295 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Emc2Q9CRD2 297 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Commd8Q9CZG3 183 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 CabyrQ9D424 453 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 PllpQ9DCU2 182 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 ParvbQ9ES46 365 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Gpc1Q9QZF2 557 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 ClcnkbQ9WUB6 687 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Zscan12Q9Z1D7 501 aa8.46□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Cyp4a12bA2A974 508 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Fibcd1A2AV25 459 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Zfp277E9Q6D6 583 aaKnown RBP8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Pgk1P09411 417 aaKnown RBP8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Slc10a3P21129 473 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 IppP28575 584 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 GabpaQ00422 454 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Hsdl2Q2TPA8 490 aaKnown RBP8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Dync1li2Q6PDL0 492 aaKnown RBP8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Gpatch2lQ6PE65 482 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Cyp2c54Q6XVG2 490 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Tmtc3Q8BRH0 920 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Znf385bQ8BXJ8 482 aaKnown RBP8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Prpf31Q8CCF0 499 aaKnown RBP8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Slc25a3Q8VEM8 357 aaKnown RBP8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 NifkQ91VE6 317 aaKnown RBP8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Rnh1Q91VI7 456 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Ecrg4Q99LS0 148 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Med7Q9CZB6 233 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Q9D2Q3 444 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Phf6Q9D4J7 364 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Prorsd1Q9D820 169 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Oxct2bQ9ESL0 520 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Asap1Q9QWY8 1147 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Tmem59Q9QY73 323 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Kcnd2Q9Z0V2 630 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Sf3b1Q99NB9 1304 aaKnown RBP8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 4930523C07RikE9Q2T4 99 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Tnfrsf11bO08712 401 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 EpoP07321 192 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 GsrP47791 500 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Cdh5P55284 784 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Tff2Q03404 129 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Pcnx4Q3UVY5 1174 aa8.45□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Sema5bQ60519 1093 aa8.45□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms