RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Btbd35f17L7MU81 498 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Btbd35f18L7MU83 498 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Timm44O35857 452 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Prl3b1P09586 222 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Traf6P70196 530 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Mpp1P70290 466 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pecam1Q08481 727 aaKnown RBP13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Btbd35f14Q1LZI5 498 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pitpnm3Q3UHE1 974 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Scn2bQ56A07 215 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Btbd35f27Q5FWA1 498 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 ScinQ60604 715 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Slc16a9Q7TM99 508 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Olfr293Q7TS10 336 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Atp2c1Q80XR2 918 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 CcnyQ8BGU5 341 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ccdc184Q8BMK5 191 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Bhlhe22Q8C6A8 355 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Zbtb8bQ8CII0 484 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Evi2bQ8VD58 444 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ndufa10Q99LC3 355 aaKnown RBP13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 GMCL1P1Q99N64 498 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Tas1r1Q99PG6 842 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Trim8Q99PJ2 551 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pcyox1Q9CQF9 505 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Fam227aQ9D3V8 625 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ccdc97Q9DBT3 340 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Akr1e2Q9DCT1 301 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Paqr5Q9DCU0 330 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Tmod2Q9JKK7 351 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Myo18aQ9JMH9 2050 aaKnown RBP13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Erich2E9Q1A6 463 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Cops5O35864 334 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Krt10P02535 570 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pim1P06803 397 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Mxd1P50538 227 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 SiaeP70665 541 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Kcnq1P97414 668 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Irf6P97431 467 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Caprin2Q05A80 1031 aaKnown RBP13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 B3gntl1Q3U129 357 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ntrk1Q3UFB7 799 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 E330034G19RikQ3UWX6 351 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Scaf8Q6DID3 1268 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Prmt6Q6NZB1 378 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Tcaf3Q6QR59 914 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Nup93Q8BJ71 819 aaKnown RBP13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Hspbap1Q8BK58 483 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pde10aQ8CA95 790 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Acad10Q8K370 1069 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 GldcQ91W43 1025 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Stk33Q924X7 491 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Lsm12Q9D0R8 195 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Gstt4Q9D4P7 240 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Klhl32A2AJX0 620 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Spin2dB1B0R2 236 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Vmn2r19G5E8G4 854 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 CenpaO35216 134 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Exoc7O35250 697 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Mmp10O55123 476 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Chrna1P04756 457 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Lamp2P17047 415 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Krt6aP50446 553 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Cdo1P60334 200 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 PgrQ00175 926 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Sv2cQ69ZS6 727 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Fastkd5Q7TMV3 762 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Dyrk4Q8BI55 632 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Tgm6Q8BM11 706 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Snapc1Q8K0S9 389 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 NeproQ8R2U2 564 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Mmp19Q9JHI0 527 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Usp21Q9QZL6 566 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Tle2Q9WVB2 767 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Psmd13Q9WVJ2 376 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Bscl2Q9Z2E9 383 aa13.73□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ces1bD3Z5G7 567 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 2010300C02RikE9Q3M9 1175 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Gm7694J3QNH8 270 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Gm10721J3QPJ9 223 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Vmn2r44L7N2E1 861 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 C1qbpO35658 278 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Klc2O88448 599 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Plk2P53351 682 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Fitm2P59266 262 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Oog3Q3UWY1 500 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Tmed1Q3V009 227 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Hsfy2Q80Y37 392 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Il17reQ8BH06 637 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Fbxo44Q8BK26 255 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Afap1l1Q8BZI0 768 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Tbc1d22aQ8R5A6 516 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Fbxo33Q8VE08 562 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 CarfQ8VHI4 689 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Usp3Q91W36 520 aaKnown RBP13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Mtfr1Q99MB2 328 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Neurl2Q9D0S4 285 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Limd1Q9QXD8 668 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Zscan4bE9Q3G0 505 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Inpp5aE9QAS7 422 aa13.72□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms