RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Mtco1P00397 514 aa23.58■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Clip4Q8CI96 704 aa23.58■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Mcoln2Q8K595 566 aa23.58■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Ddit4Q9D3F7 229 aa23.58■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 AcadsbQ9DBL1 432 aa23.58■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Nrf1Q9WU00 503 aa23.58■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Ugt1a9Q62452 528 aa23.58■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Spata20Q80YT5 790 aa23.58■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 AadatQ9WVM8 425 aa23.58■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Clk2O35491 499 aa23.58■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 LipeP54310 759 aa23.58■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Mis18bp1Q80WQ8 998 aa23.58■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 SgtaQ8BJU0 315 aa23.58■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Tcaf1Q8BNE1 924 aa23.58■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Tdrd1Q99MV1 1172 aa23.58■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Gsdmdc1Q9D8T2 487 aa23.58■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Olig1Q9JKN5 260 aa23.58■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 BhmtO35490 407 aaKnown RBP23.58■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Vps26aP40336 327 aa23.58■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 HadhQ61425 314 aa23.58■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Disc1Q811T9 852 aa23.58■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Reep1Q8BGH4 201 aa23.58■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Clic5Q8BXK9 251 aa23.58■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Rxfp1Q6R6I7 758 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 HlfQ8BW74 295 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Epsti1Q8VDI1 314 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Armt1A6H630 439 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Hnrnph3D3Z3N4 346 aaKnown RBP23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Gm3278L7N2D2 218 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 PdynO35417 248 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 S100a13P97352 98 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 LcorlQ3U285 600 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Kcna4Q61423 654 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Dlg4Q62108 724 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 SyncripQ7TMK9 623 aaKnown RBP23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Olfr1057Q7TR75 315 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Atp6v1g3Q8BMC1 118 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Chrna3Q8R4G9 499 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Snrpb2Q9CQI7 225 aaKnown RBP23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 GabrqQ9JLF1 638 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Klhl32A2AJX0 620 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Apold1E9Q0X2 246 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Ccdc7bE9Q9Y3 381 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Oas1aP11928 367 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Amz1Q8BVF9 502 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Oas1gQ8K469 367 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Gm5737A0A140LI11 423 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Xlr5bA2BI50 236 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Gm3752A6NAT4 150 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Pknox1O70477 436 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Q3UJP5 209 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Q8BGA7 448 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Dlgap2Q8BJ42 1059 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Usp20Q8C6M1 916 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Fubp1Q91WJ8 651 aaKnown RBP23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Inpp4aQ9EPW0 939 aa23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Zcchc11B2RX14 1644 aaKnown RBP23.57■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 MndalD0QMC3 538 aaKnown RBP23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Igfbp4P47879 254 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Psme3P61290 254 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Clec12aQ504P2 267 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Mxd4Q60948 209 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Slc26a2Q62273 739 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Gpatch2lQ6PE65 482 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Zswim6Q80TB7 1207 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Slc39a11Q8BWY7 342 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 KyQ8C8H8 661 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Trappc12Q8K2L8 797 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Kdm4bQ91VY5 1086 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Prkar1aQ9DBC7 381 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Ubiad1Q9DC60 336 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Cyp2j12G3UXT0 502 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Gm7694J3QNH8 270 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 AprtP08030 180 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 FynP39688 537 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 SykP48025 629 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Emilin3P59900 758 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Cct3P80318 545 aaKnown RBP23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Cfap206Q6PE87 622 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Pqlc1Q80XM9 271 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Thap3Q8BJ25 218 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Bdh2Q8JZV9 245 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Gprc5cQ8K3J9 440 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 HpgdQ8VCC1 269 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Olfr1414Q8VGU5 312 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Ttc7bE9Q6P5 843 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Sh3glb2Q8R3V5 400 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 GldcQ91W43 1025 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Tex22Q9D9U4 189 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Sh3glb1Q9JK48 365 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Ak1Q9R0Y5 194 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Abca9Q8K449 1623 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Abhd12bG3UZN6 359 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Reps1O54916 795 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Antxr2Q6DFX2 487 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 HpseQ6YGZ1 535 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Tyw3Q8BSA9 257 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Slitrk6Q8C110 840 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Hkdc1Q91W97 915 aa23.56■■□□□ 1.36
Sh3rf1-201ENSMUST00000034060 Ggt7Q99JP7 662 aa23.56■■□□□ 1.36
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms