RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Barx2O08686 283 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 AmacrO09174 381 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Pknox1O70477 436 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 P01734 135 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Cd3gP11942 182 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Mcpt4P21812 246 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Rpl26P61255 145 aaKnown RBP11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 CtscP97821 462 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Serpina1cQ00896 412 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Sorbs2Q3UTJ2 1180 aaKnown RBP11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Sv2cQ69ZS6 727 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Ppp2r2bQ6ZWR4 443 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Ttc29Q80VM3 471 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Znf598Q80YR4 908 aaKnown RBP11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Slc17a6Q8BLE7 582 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Kctd6Q8BNL5 237 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 PigwQ8C398 503 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Stard7Q8R1R3 373 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Lgals12Q91VD1 314 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Frmd4bQ920B0 1035 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 NelfcdQ922L6 591 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Dtwd1Q9D8U7 304 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 EqtnQ9D9V2 337 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Prl2b1Q9DAZ2 228 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Rhox9Q9EQM5 227 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Tlr5Q9JLF7 859 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Aldh18a1Q9Z110 795 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Zfp277E9Q6D6 583 aaKnown RBP11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Zfp850J3QPC5 689 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Dusp8O09112 663 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Apba3O88888 571 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Tigd2Q0VBL1 525 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Cyp11b1Q3TG86 501 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Prmt9Q3U3W5 846 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Srd5a1Q68FF9 255 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Elmo2Q8BHL5 732 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 PrameQ9D4Z5 464 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Plin3Q9DBG5 437 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Armc8Q9DBR3 673 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Cib1Q9Z0F4 191 aa11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 HnrnpfQ9Z2X1 415 aaKnown RBP11.78□□□□□ -0.52
Sdc1-201ENSMUST00000020911 NinQ61043 2035 aa11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Dock2Q8C3J5 1828 aa11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Kpna7C0LLJ0 499 aa11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Gm5926E9PWJ8 236 aa11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 AunipE9Q6Z5 340 aa11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Dcdc2bF7BCK0 340 aa11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Cyp2c68K7N6C2 491 aa11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Epb41P48193 858 aa11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Matn1P51942 500 aaKnown RBP11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Kmt5aQ2YDW7 349 aa11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 PoliQ6R3M4 717 aa11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Tor4aQ8BH02 426 aa11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 TbckQ8BM85 762 aa11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Senp7Q8BUH8 1037 aa11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Hars2Q99KK9 505 aa11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Pkp2Q9CQ73 795 aaKnown RBP11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Tmbim4Q9DA39 238 aa11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Spaca1Q9DA48 305 aa11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Vps35Q9EQH3 796 aaKnown RBP11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Asb4Q9WV71 426 aa11.77□□□□□ -0.52
Sdc1-201ENSMUST00000020911 Ankrd34aB2RW11 495 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 IppP28575 584 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gucy2eP52785 1108 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Npas2P97460 816 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Trim21Q62191 470 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Msantd2Q6NZR2 559 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Garem2Q6PAJ3 880 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 E2f7Q6S7F2 904 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Cyp2c54Q6XVG2 490 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Pcmtd2Q8BHD8 359 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Epc2Q8C0I4 808 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Prpf39Q8K2Z2 665 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Usp12Q9D9M2 370 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Ralgps2Q9ERD6 590 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Htra1Q9R118 480 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Slfn14V9GXG1 899 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Lrrc72A0A1Y7VMI0 288 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 DgkhD3YXJ0 1156 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Pot1bH7BX60 640 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gm3182K7N6T8 263 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Dnase1l3O55070 310 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Sh3pxd2aO89032 1124 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 ZfaP23607 742 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Rps12P63323 132 aaKnown RBP11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 CiitaP79621 1155 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Rab42Q0PD08 215 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Zbtb48Q1H9T6 681 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Tmem63bQ3TWI9 832 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Kif11Q6P9P6 1052 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 QpctlQ8BH73 383 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Olfml3Q8BK62 406 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Galnt13Q8CF93 556 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Rmnd1Q8CI78 450 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Slc26a6Q8CIW6 758 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Sh2d5Q8JZW5 429 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Wrap53Q8VC51 532 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Rnh1Q91VI7 456 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 CoprsQ9CQ13 173 aa11.77□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Fam90a1bQ9D4F3 419 aa11.77□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms