RNA–Protein interactions for RNA: ENST00000641746.1

CASC19-256, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 958 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-256	ENST00000641746	PLXNB3	Q9ULL4	1909 aa		5.67	□□□□□ -1.5
CASC19-256	ENST00000641746	PTPRC	P08575	1304 aa		5.67	□□□□□ -1.5
CASC19-256	ENST00000641746	APC2	O95996	2303 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	PTPRQ	Q9UMZ3	2332 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	KIAA1217	Q5T5P2	1943 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746		A0A1W2PQU0	124 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	RRN3P2	A6NIE6	340 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	PLK4	O00444	970 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	ZNF263	O14978	683 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	ATG13	O75143	517 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	SOD2	P04179	222 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	PSMC3	P17980	439 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	RPL17	P18621	184 aa	Known RBP	5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	TNFAIP3	P21580	790 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	BCKDHB	P21953	392 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	MSX2	P35548	267 aa	Predicted RBP	5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	TCF7	P36402	384 aa	Predicted RBP	5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	GFPT1	Q06210	699 aa	Predicted RBP	5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	WASHC5	Q12768	1159 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	NEDD9	Q14511	834 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	PLCB4	Q15147	1175 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	PON2	Q15165	354 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	GFOD2	Q3B7J2	385 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	PPM1L	Q5SGD2	360 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	CFAP161	Q6P656	301 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	C1orf228	Q6PIY5	440 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	RASSF3	Q86WH2	238 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	TMC8	Q8IU68	726 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	TMPRSS6	Q8IU80	811 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	NAXD	Q8IW45	347 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	SYNPO	Q8N3V7	929 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	THAP3	Q8WTV1	239 aa	Predicted RBP	5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	DCAF4	Q8WV16	495 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	TRAPPC12	Q8WVT3	735 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	PGBD4	Q96DM1	585 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	MFSD3	Q96ES6	412 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	SCLT1	Q96NL6	688 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	STRBP	Q96SI9	672 aa	Known RBP	5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	PDCD2L	Q9BRP1	358 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	TTPAL	Q9BTX7	342 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	CENPO	Q9BU64	300 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	CXorf56	Q9H5V9	222 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	ZNF287	Q9HBT7	754 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	CPNE5	Q9HCH3	593 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	AASDHPPT	Q9NRN7	309 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	TMEM51	Q9NW97	253 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	ERAP1	Q9NZ08	941 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	GDE1	Q9NZC3	331 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	HECA	Q9UBI9	543 aa	Predicted RBP	5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	PLEKHB1	Q9UF11	243 aa	Predicted RBP	5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	REXO2	Q9Y3B8	237 aa	Known RBP	5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	PCDHA1	Q9Y5I3	950 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	WDR19	Q8NEZ3	1342 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	MYO5A	Q9Y4I1	1855 aa	Known RBP	5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	SDK1	Q7Z5N4	2213 aa		5.66	□□□□□ -1.5
CASC19-256	ENST00000641746	SMIM35	A0A1B0GVV1	85 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	KRTAP23-1	A1A580	65 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746		A6NCN8	305 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	VSTM5	A8MXK1	200 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746		E9PAM4	449 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	AGRP	O00253	132 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	SNX2	O60749	519 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	ALDH2	P05091	517 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	HNRNPA1	P09651	372 aa	Known RBP eCLIP	5.65	□□□□□ -1.5	1e-5	■■■□□ 15.8
CASC19-256	ENST00000641746	FCAR	P24071	287 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	ETV4	P43268	484 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	GLUD2	P49448	558 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	DGKE	P52429	567 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	GRM4	Q14833	912 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	PABPC1L	Q4VXU2	614 aa	Known RBP	5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	SBK1	Q52WX2	424 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	RRP12	Q5JTH9	1297 aa	Known RBP	5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	VIT	Q6UXI7	678 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	C11orf74	Q86VG3	221 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	SYT12	Q8IV01	421 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	SRRM1	Q8IYB3	904 aa	Known RBP	5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	NDUFAF2	Q8N183	169 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	IL31RA	Q8NI17	732 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	CCDC47	Q96A33	483 aa	Known RBP	5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	NXPE2	Q96DL1	559 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	MSANTD3	Q96H12	275 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	MEIS3	Q99687	375 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	PI4K2A	Q9BTU6	479 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	SPATA9	Q9BWV2	254 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	ZDHHC5	Q9C0B5	715 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	C8orf33	Q9H7E9	229 aa	Predicted RBP	5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	SLC39A2	Q9NP94	309 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	TBC1D13	Q9NVG8	400 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	OBP2A	Q9NY56	170 aa		5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	DNMT3B	Q9UBC3	853 aa	Known RBP	5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	MORC2	Q9Y6X9	1032 aa	Predicted RBP	5.65	□□□□□ -1.5
CASC19-256	ENST00000641746	MYH8	P13535	1937 aa		5.65	□□□□□ -1.51
CASC19-256	ENST00000641746	ZBED9	Q6R2W3	1325 aa		5.65	□□□□□ -1.51
CASC19-256	ENST00000641746	ATXN2	Q99700	1313 aa	Known RBP	5.65	□□□□□ -1.51
CASC19-256	ENST00000641746	ATM	Q13315	3056 aa		5.64	□□□□□ -1.51
CASC19-256	ENST00000641746	DOCK8	Q8NF50	2099 aa		5.64	□□□□□ -1.51
CASC19-256	ENST00000641746		A0A0U1RQF3	1178 aa		5.64	□□□□□ -1.51
CASC19-256	ENST00000641746	SPECC1L-ADORA2A	F8WAN1	911 aa		5.64	□□□□□ -1.51
CASC19-256	ENST00000641746	NMT2	O60551	498 aa		5.64	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms