RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 IFI44Q8TCB0 444 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 ARRDC3Q96B67 414 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 PLD4Q96BZ4 506 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 DNAJC19Q96DA6 116 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 TMA16Q96EY4 203 aaKnown RBP8.17□□□□□ -1.1
PHGDH-217ENST00000641455 KLHDC7BQ96G42 594 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 APOLD1Q96LR9 279 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 MYOCQ99972 504 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 SDCBP2Q9H190 292 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 XYLT2Q9H1B5 865 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 PANK4Q9NVE7 773 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 UCKL1Q9NWZ5 548 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 CLIC5Q9NZA1 410 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 STK17AQ9UEE5 414 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 CCDC39Q9UFE4 941 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 HMGXB4Q9UGU5 601 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 ATXN7L1Q9ULK2 861 aaPredicted RBP8.17□□□□□ -1.1
PHGDH-217ENST00000641455 TPX2Q9ULW0 747 aaKnown RBP8.17□□□□□ -1.1
PHGDH-217ENST00000641455 CA5BQ9Y2D0 317 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 KIF3AQ9Y496 699 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 TEP1Q99973 2627 aaKnown RBP8.17□□□□□ -1.1
PHGDH-217ENST00000641455 A0A1W2PNU3 283 aaPredicted RBP8.16□□□□□ -1.1
PHGDH-217ENST00000641455 CPED1A4D0V7 1026 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 BLACEA4D250 179 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 PMS2P1A4D2B8 440 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 HHLA1C9JL84 531 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 STX6O43752 255 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 GP1BAP07359 652 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 THEGLP0DJG4 465 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 P4HA1P13674 534 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 GOT1P17174 413 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 CD70P32970 193 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 KIF11P52732 1056 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 ZNF445P59923 1031 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 SKOR1P84550 965 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 OVGP1Q12889 678 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 HNRNPA1L2Q32P51 320 aaKnown RBP8.16□□□□□ -1.1
PHGDH-217ENST00000641455 LRRK2Q5S007 2527 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 RRAGBQ5VZM2 374 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 HIST2H2BCQ6DN03 193 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 CRTC1Q6UUV9 634 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.16□□□□□ -1.1
PHGDH-217ENST00000641455 RBM44Q6ZP01 1051 aaKnown RBP8.16□□□□□ -1.1
PHGDH-217ENST00000641455 CCDC186Q7Z3E2 898 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 IQCHQ86VS3 1027 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 PTRH1Q86Y79 214 aaKnown RBP8.16□□□□□ -1.1
PHGDH-217ENST00000641455 JAMLQ86YT9 394 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 CCDC65Q8IXS2 484 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 ARHGAP18Q8N392 663 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 AADATQ8N5Z0 425 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.16□□□□□ -1.1
PHGDH-217ENST00000641455 WDR36Q8NI36 951 aaKnown RBP8.16□□□□□ -1.1
PHGDH-217ENST00000641455 WFDC5Q8TCV5 224 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 ZNF516Q92618 1163 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 ZSCAN31Q96LW9 406 aaPredicted RBP8.16□□□□□ -1.1
PHGDH-217ENST00000641455 LRRC4CQ9HCJ2 640 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 STIM2Q9P246 746 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 TJP2Q9UDY2 1190 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 MAN2B2Q9Y2E5 1009 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 CEP83Q9Y592 693 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 PCDHGA8Q9Y5G5 932 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 ENTPD2Q9Y5L3 495 aa8.16□□□□□ -1.1
PHGDH-217ENST00000641455 CDRT15L2A8MXV6 281 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 TTC34A8MYJ7 566 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 CLIC2O15247 247 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 EFSO43281 561 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 TBL1XO60907 577 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 BMP15O95972 392 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 ADH1BP00325 375 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 IL1BP01584 269 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 ITGB2P05107 769 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 C5AR1P21730 350 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 TGM2P21980 687 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 TXLNAP40222 546 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 CSKP41240 450 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 CASP4P49662 377 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 SGSHP51688 502 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 SRSF6Q13247 344 aaKnown RBP8.15□□□□□ -1.1
PHGDH-217ENST00000641455 NCOA4Q13772 614 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 IGFBP7Q16270 282 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 CDKN3Q16667 212 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 BMT2Q1RMZ1 405 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 SKIDA1Q1XH10 827 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 SETMARQ53H47 684 aaPredicted RBP8.15□□□□□ -1.1
PHGDH-217ENST00000641455 RNF219Q5W0B1 726 aaPredicted RBP8.15□□□□□ -1.1
PHGDH-217ENST00000641455 EFL1Q7Z2Z2 1120 aaKnown RBP8.15□□□□□ -1.1
PHGDH-217ENST00000641455 CLEC14AQ86T13 490 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 MFN1Q8IWA4 741 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 FAM217AQ8IXS0 508 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 CRYBG2Q8N1P7 616 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 STK40Q8N2I9 435 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 ZNF276Q8N554 614 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 GRAMD1AQ96CP6 724 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 CYFIP2Q96F07 1278 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 EPSTI1Q96J88 318 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 CALN1Q9BXU9 219 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 USP29Q9HBJ7 922 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 PNPLA8Q9NP80 782 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 NLGN3Q9NZ94 848 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 CYTH4Q9UIA0 394 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms