RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 C16orf45Q96MC5 204 aaPredicted RBP9.41□□□□□ -0.9
SCARB2-225ENST00000640900 RNF157Q96PX1 679 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 OSBPL9Q96SU4 736 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 NAPGQ99747 312 aaPredicted RBP9.41□□□□□ -0.9
SCARB2-225ENST00000640900 EPAS1Q99814 870 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 HERPUD2Q9BSE4 406 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 DHX35Q9H5Z1 703 aaKnown RBP9.41□□□□□ -0.9
SCARB2-225ENST00000640900 ZWILCHQ9H900 591 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 TRPV5Q9NQA5 729 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 HPS4Q9NQG7 708 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 ARHGEF4Q9NR80 690 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 PRKAG3Q9UGI9 489 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 LSM7Q9UK45 103 aaKnown RBP9.41□□□□□ -0.9
SCARB2-225ENST00000640900 FBXO10Q9UK96 956 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 FAM50BQ9Y247 325 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 TBC1D30Q9Y2I9 924 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 SH3BP1Q9Y3L3 701 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 NR2E1Q9Y466 385 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 COL4A2P08572 1712 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 COL4A3Q01955 1670 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 CHADO15335 359 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 HOXC11O43248 304 aaPredicted RBP9.4□□□□□ -0.9
SCARB2-225ENST00000640900 MOCS2O96007 188 aaPredicted RBP9.4□□□□□ -0.9
SCARB2-225ENST00000640900 IRF1P10914 325 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 BMP1P13497 986 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 TNNT1P13805 278 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 IL9P15248 144 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 RHOQP17081 205 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 GOT1P17174 413 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 PSMC3P17980 439 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 TCP1P17987 556 aaKnown RBP9.4□□□□□ -0.9
SCARB2-225ENST00000640900 GBP2P32456 591 aaPredicted RBP9.4□□□□□ -0.9
SCARB2-225ENST00000640900 SGSHP51688 502 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 CDH6P55285 790 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 ADCY2Q08462 1091 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 MMRN1Q13201 1228 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 PAFAH1B3Q15102 231 aaKnown RBP9.4□□□□□ -0.9
SCARB2-225ENST00000640900 PDGFRLQ15198 375 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 ALFQ53S48 1182 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 TFDP3Q5H9I0 405 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 TTC39BQ5VTQ0 682 aaPredicted RBP9.4□□□□□ -0.9
SCARB2-225ENST00000640900 FYB2Q5VWT5 728 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 RAP1GAP2Q684P5 730 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 RFWD3Q6PCD5 774 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 RHBDF2Q6PJF5 856 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 RFX8Q6ZV50 586 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 BBS12Q6ZW61 710 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 ZNF572Q7Z3I7 529 aaPredicted RBP9.4□□□□□ -0.9
SCARB2-225ENST00000640900 KIAA0907Q7Z7F0 614 aaPredicted RBP9.4□□□□□ -0.9
SCARB2-225ENST00000640900 ETFBKMTQ8IXQ9 262 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 RTL3Q8N8U3 475 aaKnown RBP9.4□□□□□ -0.9
SCARB2-225ENST00000640900 TDRD5Q8NAT2 981 aaKnown RBP9.4□□□□□ -0.9
SCARB2-225ENST00000640900 KCTD6Q8NC69 237 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 ACTRT1Q8TDG2 376 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 IRF7Q92985 503 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 TBC1D31Q96DN5 1066 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 OSBPL8Q9BZF1 889 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 SIK2Q9H0K1 926 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 NOL6Q9H6R4 1146 aaKnown RBP9.4□□□□□ -0.9
SCARB2-225ENST00000640900 KLHL11Q9NVR0 708 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 TMEM248Q9NWD8 314 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 IGSF9Q9P2J2 1179 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 DNAI1Q9UI46 699 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 VANGL2Q9ULK5 521 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 NUMBLQ9Y6R0 609 aa9.4□□□□□ -0.9
SCARB2-225ENST00000640900 LRRD1A4D1F6 860 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 OTOL1A6NHN0 477 aaPredicted RBP9.39□□□□□ -0.91
SCARB2-225ENST00000640900 F5H5T6 163 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 PI4K2BG5E9Z4 385 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 H3BRJ5 948 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 EEF2KO00418 725 aaKnown RBP9.39□□□□□ -0.91
SCARB2-225ENST00000640900 KCNK3O14649 394 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 FGF10O15520 208 aaPredicted RBP9.39□□□□□ -0.91
SCARB2-225ENST00000640900 CNTN5O94779 1100 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 KRT1P04264 644 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 CYP17A1P05093 508 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 HOXD9P28356 352 aaPredicted RBP9.39□□□□□ -0.91
SCARB2-225ENST00000640900 CASQ1P31415 396 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 GGCXP38435 758 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 SSR1P43307 286 aaKnown RBP9.39□□□□□ -0.91
SCARB2-225ENST00000640900 CDH4P55283 916 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 RPS24P62847 133 aaKnown RBP9.39□□□□□ -0.91
SCARB2-225ENST00000640900 ZP2Q05996 745 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 DHCR24Q15392 516 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 MPPE1Q53F39 396 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 CXorf57Q6NSI4 855 aaKnown RBP9.39□□□□□ -0.91
SCARB2-225ENST00000640900 AADACL2Q6P093 401 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 CHSY1Q86X52 802 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 TMEM25Q86YD3 366 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 SLC13A5Q86YT5 568 aaPredicted RBP9.39□□□□□ -0.91
SCARB2-225ENST00000640900 ADHFE1Q8IWW8 467 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 LGI2Q8N0V4 545 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 UMODL1-AS1Q8N2C9 162 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 PLD5Q8N7P1 536 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 HJURPQ8NCD3 748 aaPredicted RBP9.39□□□□□ -0.91
SCARB2-225ENST00000640900 ATXN2LQ8WWM7 1075 aaKnown RBP9.39□□□□□ -0.91
SCARB2-225ENST00000640900 CHFRQ96EP1 664 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 ALG14Q96F25 216 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 OLFM3Q96PB7 478 aa9.39□□□□□ -0.91
SCARB2-225ENST00000640900 KXD1Q9BQD3 176 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms