RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 ZNF569Q5MCW4 686 aa22.24■■□□□ 1.15
TSPAN9-208ENST00000640568 MPP7Q5T2T1 576 aa22.24■■□□□ 1.15
TSPAN9-208ENST00000640568 UBALD2Q8IYN6 164 aa22.24■■□□□ 1.15
TSPAN9-208ENST00000640568 CARNMT1Q8N4J0 409 aa22.24■■□□□ 1.15
TSPAN9-208ENST00000640568 CD101Q93033 1021 aa22.24■■□□□ 1.15
TSPAN9-208ENST00000640568 MYEOVQ96EZ4 313 aa22.24■■□□□ 1.15
TSPAN9-208ENST00000640568 C8orf33Q9H7E9 229 aaPredicted RBP22.24■■□□□ 1.15
TSPAN9-208ENST00000640568 PCDH18Q9HCL0 1135 aa22.24■■□□□ 1.15
TSPAN9-208ENST00000640568 HEBP1Q9NRV9 189 aa22.24■■□□□ 1.15
TSPAN9-208ENST00000640568 KCND1Q9NSA2 647 aa22.24■■□□□ 1.15
TSPAN9-208ENST00000640568 PACSIN2Q9UNF0 486 aaPredicted RBP22.24■■□□□ 1.15
TSPAN9-208ENST00000640568 IGLV3-10A0A075B6K4 115 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 A0A1B0GVM2 712 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 TCAF2A6NFQ2 919 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 OTOL1A6NHN0 477 aaPredicted RBP22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 H0Y626 953 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 PENKP01210 267 aaPredicted RBP22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 GOT1P17174 413 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 HOXD9P28356 352 aaPredicted RBP22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 GJA4P35212 333 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 DNA2P51530 1060 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 CDH4P55283 916 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 SEMA3BQ13214 749 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 CDH18Q13634 790 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 C5orf22Q49AR2 442 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 MANEALQ5VSG8 457 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 CIR1Q86X95 450 aaPredicted RBP22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 MFN1Q8IWA4 741 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 ZNF683Q8IZ20 524 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 NAT16Q8N8M0 369 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 ZNF557Q8N988 423 aaPredicted RBP22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 KRT35Q92764 455 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 EXOC4Q96A65 974 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 CD320Q9NPF0 282 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 MPP6Q9NZW5 540 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 FBXL21Q9UKT6 434 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 PCDHA3Q9Y5H8 950 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 PIAS3Q9Y6X2 628 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 KIAA1549LQ6ZVL6 1849 aa22.23■■□□□ 1.15
TSPAN9-208ENST00000640568 DRGXA6NNA5 263 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 FGF10O15520 208 aaPredicted RBP22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 CLDN11O75508 207 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 LUC7L3O95232 432 aaKnown RBP22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 KDELR1P24390 212 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 RWDD2BP57060 319 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 CHST9Q7L1S5 443 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 CCDC50Q8IVM0 306 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 KATNAL2Q8IYT4 538 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 C17orf53Q8N3J3 647 aaPredicted RBP22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 RBM41Q96IZ5 413 aaKnown RBP22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 RCOR3Q9P2K3 495 aaPredicted RBP22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 PI4K2BG5E9Z4 385 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 CNTN5O94779 1100 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 SOX9P48436 509 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 MARCKSL1P49006 195 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 ZNF177Q13360 481 aaPredicted RBP22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 DPYSL3Q14195 570 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 RPS6KA1Q15418 735 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 ALFQ53S48 1182 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 RFX8Q6ZV50 586 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 TFAP2DQ7Z6R9 452 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 SLC35F6Q8N357 371 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 RAPGEF5Q92565 580 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 MSANTD3Q96H12 275 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 ZNF670Q9BS34 389 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 DNAJC17Q9NVM6 304 aaKnown RBP22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 DONSONQ9NYP3 566 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 CWC15Q9P013 229 aaKnown RBP22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 CA14Q9ULX7 337 aa22.22■■□□□ 1.15
TSPAN9-208ENST00000640568 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.21■■□□□ 1.15
TSPAN9-208ENST00000640568 SPECC1L-ADORA2AF8WAN1 911 aa22.21■■□□□ 1.15
TSPAN9-208ENST00000640568 CACNG3O60359 315 aa22.21■■□□□ 1.15
TSPAN9-208ENST00000640568 ZRANB2O95218 330 aaKnown RBP eCLIP22.21■■□□□ 1.15
TSPAN9-208ENST00000640568 CD48P09326 243 aa22.21■■□□□ 1.15
TSPAN9-208ENST00000640568 RHOQP17081 205 aa22.21■■□□□ 1.15
TSPAN9-208ENST00000640568 HOXC13P31276 330 aa22.21■■□□□ 1.15
TSPAN9-208ENST00000640568 CETN2P41208 172 aa22.21■■□□□ 1.15
TSPAN9-208ENST00000640568 IRAK1P51617 712 aa22.21■■□□□ 1.15
TSPAN9-208ENST00000640568 PREPLQ4J6C6 727 aaPredicted RBP22.21■■□□□ 1.15
TSPAN9-208ENST00000640568 SLC44A4Q53GD3 710 aa22.21■■□□□ 1.15
TSPAN9-208ENST00000640568 MEI1Q5TIA1 1274 aa22.21■■□□□ 1.15
TSPAN9-208ENST00000640568 RALGPS2Q86X27 583 aaPredicted RBP22.21■■□□□ 1.15
TSPAN9-208ENST00000640568 RNF25Q96BH1 459 aaPredicted RBP22.21■■□□□ 1.15
TSPAN9-208ENST00000640568 HES6Q96HZ4 224 aa22.21■■□□□ 1.15
TSPAN9-208ENST00000640568 MAK16Q9BXY0 300 aaKnown RBP22.21■■□□□ 1.15
TSPAN9-208ENST00000640568 RETREG1Q9H6L5 497 aa22.21■■□□□ 1.15
TSPAN9-208ENST00000640568 GLULP15104 373 aa22.2■■□□□ 1.14
TSPAN9-208ENST00000640568 OR1E1P30953 314 aa22.2■■□□□ 1.14
TSPAN9-208ENST00000640568 CTHP32929 405 aa22.2■■□□□ 1.14
TSPAN9-208ENST00000640568 HCAR3P49019 387 aa22.2■■□□□ 1.14
TSPAN9-208ENST00000640568 ARSEP51690 589 aa22.2■■□□□ 1.14
TSPAN9-208ENST00000640568 GNG11P61952 73 aa22.2■■□□□ 1.14
TSPAN9-208ENST00000640568 MLF2Q15773 248 aaPredicted RBP22.2■■□□□ 1.14
TSPAN9-208ENST00000640568 C1orf228Q6PIY5 440 aa22.2■■□□□ 1.14
TSPAN9-208ENST00000640568 C12orf40Q86WS4 652 aa22.2■■□□□ 1.14
TSPAN9-208ENST00000640568 RCOR2Q8IZ40 523 aa22.2■■□□□ 1.14
TSPAN9-208ENST00000640568 EXD1Q8NHP7 514 aa22.2■■□□□ 1.14
TSPAN9-208ENST00000640568 FAM71BQ8TC56 605 aa22.2■■□□□ 1.14
TSPAN9-208ENST00000640568 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms