RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 GLUD2P49448 558 aa3.92□□□□□ -1.78
AP3S1-209ENST00000640413 U2AF1Q01081 240 aaKnown RBP eCLIP3.92□□□□□ -1.78
AP3S1-209ENST00000640413 GPS1Q13098 491 aa3.92□□□□□ -1.78
AP3S1-209ENST00000640413 PPP2R5AQ15172 486 aa3.92□□□□□ -1.78
AP3S1-209ENST00000640413 RRAGBQ5VZM2 374 aa3.92□□□□□ -1.78
AP3S1-209ENST00000640413 HIST2H2BCQ6DN03 193 aa3.92□□□□□ -1.78
AP3S1-209ENST00000640413 PPP4R4Q6NUP7 873 aa3.92□□□□□ -1.78
AP3S1-209ENST00000640413 CREB3L2Q70SY1 520 aa3.92□□□□□ -1.78
AP3S1-209ENST00000640413 CYB5R4Q7L1T6 521 aa3.92□□□□□ -1.78
AP3S1-209ENST00000640413 GABPB2Q8TAK5 448 aaPredicted RBP3.92□□□□□ -1.78
AP3S1-209ENST00000640413 GLMPQ8WWB7 406 aa3.92□□□□□ -1.78
AP3S1-209ENST00000640413 JDP2Q8WYK2 163 aa3.92□□□□□ -1.78
AP3S1-209ENST00000640413 RUNDC1Q96C34 613 aa3.92□□□□□ -1.78
AP3S1-209ENST00000640413 SHROOM4Q9ULL8 1493 aa3.92□□□□□ -1.78
AP3S1-209ENST00000640413 PLSCR5A0PG75 271 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 I6L893 689 aaPredicted RBP3.91□□□□□ -1.78
AP3S1-209ENST00000640413 M0QZQ0 153 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 MYF5P13349 255 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 PMS2P54278 862 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 MINDY4Q4G0A6 757 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 ARHGAP29Q52LW3 1261 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 ENTPD8Q5MY95 495 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 OTUD1Q5VV17 481 aaPredicted RBP3.91□□□□□ -1.78
AP3S1-209ENST00000640413 CXorf57Q6NSI4 855 aaKnown RBP3.91□□□□□ -1.78
AP3S1-209ENST00000640413 CCDC144NLQ6NUI1 221 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 KRT28Q7Z3Y7 464 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 CLASRPQ8N2M8 674 aaKnown RBP3.91□□□□□ -1.78
AP3S1-209ENST00000640413 SDR16C5Q8N3Y7 309 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 ENGASEQ8NFI3 743 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 OR52N4Q8NGI2 321 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 APIPQ96GX9 242 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 SPRY4Q9C004 299 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 LRRC27Q9C0I9 530 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 PRDM16Q9HAZ2 1276 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 RXFP3Q9NSD7 469 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.91□□□□□ -1.78
AP3S1-209ENST00000640413 TCEAL9Q9UHQ7 104 aa3.91□□□□□ -1.78
AP3S1-209ENST00000640413 PRR23AA6NEV1 266 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 A6NNZ2 444 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 PPP6R2O75170 966 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 IGLV2-11P01706 119 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 POLE2P56282 527 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 DSC1Q08554 894 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 DNTTIP2Q5QJE6 756 aaKnown RBP3.9□□□□□ -1.79
AP3S1-209ENST00000640413 FAM102BQ5T8I3 360 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 RNF220Q5VTB9 566 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 DCAF12L2Q5VW00 463 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 H1FNTQ75WM6 255 aaPredicted RBP3.9□□□□□ -1.79
AP3S1-209ENST00000640413 RNF44Q7L0R7 432 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 KDELC2Q7Z4H8 507 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 LRTOMTQ8WZ04 291 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 OVCA2Q8WZ82 227 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 RTP4Q96DX8 246 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 ZNF419Q96HQ0 510 aaPredicted RBP3.9□□□□□ -1.79
AP3S1-209ENST00000640413 NODALQ96S42 347 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 POLDIP3Q9BY77 421 aaKnown RBP3.9□□□□□ -1.79
AP3S1-209ENST00000640413 IL21RQ9HBE5 538 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 HEYLQ9NQ87 328 aaPredicted RBP3.9□□□□□ -1.79
AP3S1-209ENST00000640413 TCF7L2Q9NQB0 619 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 EID1Q9Y6B2 187 aa3.9□□□□□ -1.79
AP3S1-209ENST00000640413 A0A087WZ62 844 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 CXorf65A6NEN9 183 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 F8W8V4 182 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 KCNQ3O43525 872 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 CCNT2O60583 730 aaKnown RBP3.89□□□□□ -1.79
AP3S1-209ENST00000640413 CNTN5O94779 1100 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 KAT7O95251 611 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 SP1P08047 785 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 ZNF12P17014 697 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 GSTM5P46439 218 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 CXCR3P49682 368 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 SELENOVP59797 346 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 SEC61A1P61619 476 aaKnown RBP3.89□□□□□ -1.79
AP3S1-209ENST00000640413 PMPCAQ10713 525 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 NFE2Q16621 373 aaPredicted RBP3.89□□□□□ -1.79
AP3S1-209ENST00000640413 ZNF449Q6P9G9 518 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 CRTC1Q6UUV9 634 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 C16orf89Q6UX73 402 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 MEX3BQ6ZN04 569 aaKnown RBP3.89□□□□□ -1.79
AP3S1-209ENST00000640413 CLIP4Q8N3C7 705 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 PAQR4Q8N4S7 273 aaPredicted RBP3.89□□□□□ -1.79
AP3S1-209ENST00000640413 WBP2Q969T9 261 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 FAM204AQ9H8W3 233 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 SDF2L1Q9HCN8 221 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 C1orf112Q9NSG2 853 aa3.89□□□□□ -1.79
AP3S1-209ENST00000640413 LOC102724159A0A0B4J2E5 919 aa3.88□□□□□ -1.79
AP3S1-209ENST00000640413 SLC16A5O15375 505 aa3.88□□□□□ -1.79
AP3S1-209ENST00000640413 ZSCAN9O15535 394 aaPredicted RBP3.88□□□□□ -1.79
AP3S1-209ENST00000640413 NEURL1O76050 574 aa3.88□□□□□ -1.79
AP3S1-209ENST00000640413 TGM2P21980 687 aa3.88□□□□□ -1.79
AP3S1-209ENST00000640413 ITGB8P26012 769 aa3.88□□□□□ -1.79
AP3S1-209ENST00000640413 CACNB3P54284 484 aa3.88□□□□□ -1.79
AP3S1-209ENST00000640413 SLC37A1P57057 533 aa3.88□□□□□ -1.79
AP3S1-209ENST00000640413 POU3F1Q03052 451 aaPredicted RBP3.88□□□□□ -1.79
AP3S1-209ENST00000640413 POLD3Q15054 466 aaPredicted RBP3.88□□□□□ -1.79
AP3S1-209ENST00000640413 PWP2Q15269 919 aaKnown RBP3.88□□□□□ -1.79
AP3S1-209ENST00000640413 SF3B4Q15427 424 aaKnown RBP eCLIP3.88□□□□□ -1.79
AP3S1-209ENST00000640413 P3H1Q32P28 736 aa3.88□□□□□ -1.79
AP3S1-209ENST00000640413 WBP2NLQ6ICG8 309 aa3.88□□□□□ -1.79
AP3S1-209ENST00000640413 PIK3AP1Q6ZUJ8 805 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms