RNA–Protein interactions for RNA: ENST00000639956.1

SPIN3-232, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,998 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-232ENST00000639956 NAPRTQ6XQN6 538 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 ZNF483Q8TF39 744 aaPredicted RBP12.8□□□□□ -0.36
SPIN3-232ENST00000639956 RNF139Q8WU17 664 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 KCNN1Q92952 543 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 ATP2A3Q93084 1043 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 QKIQ96PU8 341 aaKnown RBP eCLIP12.8□□□□□ -0.36
SPIN3-232ENST00000639956 EBF3Q9H4W6 596 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 MOCS1Q9NZB8 636 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 RGPD3A6NKT7 1758 aaPredicted RBP12.8□□□□□ -0.36
SPIN3-232ENST00000639956 RGPD4Q7Z3J3 1758 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 BPTFQ12830 3046 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 KLF11O14901 512 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 PHGDHO43175 533 aaKnown RBP12.8□□□□□ -0.36
SPIN3-232ENST00000639956 CHRNGP07510 517 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 SERPINA6P08185 405 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 TCN1P20061 433 aaPredicted RBP12.8□□□□□ -0.36
SPIN3-232ENST00000639956 CCNFP41002 786 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 IDH3AP50213 366 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 ZNF460Q14592 562 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 SLC9B1Q4ZJI4 515 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 PPM1LQ5SGD2 360 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 FOXB2Q5VYV0 432 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 EXOC8Q8IYI6 725 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 MAPK15Q8TD08 544 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 RTP4Q96DX8 246 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 SGF29Q96ES7 293 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 ZFP42Q96MM3 310 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 TUBGCP5Q96RT8 1024 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 C16orf70Q9BSU1 422 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 ANLNQ9NQW6 1124 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 SNX15Q9NRS6 342 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 SOX13Q9UN79 622 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 ANK1P16157 1881 aa12.8□□□□□ -0.36
SPIN3-232ENST00000639956 A0A0G2JLL6 359 aaPredicted RBP12.79□□□□□ -0.36
SPIN3-232ENST00000639956 HSPA4LO95757 839 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 IREB2P48200 963 aaKnown RBP12.79□□□□□ -0.36
SPIN3-232ENST00000639956 BST2Q10589 180 aaKnown RBP12.79□□□□□ -0.36
SPIN3-232ENST00000639956 PAN2Q504Q3 1202 aaKnown RBP12.79□□□□□ -0.36
SPIN3-232ENST00000639956 ZNF484Q5JVG2 852 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 FBXO47Q5MNV8 452 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 MARCH8Q5T0T0 291 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 C9orf57Q5W0N0 161 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 NXNQ6DKJ4 435 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 FRMD7Q6ZUT3 714 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 PRRT2Q7Z6L0 340 aaPredicted RBP12.79□□□□□ -0.36
SPIN3-232ENST00000639956 MCUQ8NE86 351 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 CDCA5Q96FF9 252 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 KCNK16Q96T55 309 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 RHOBTB2Q9BYZ6 727 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 CHRAC1Q9NRG0 131 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 INPP5FQ9Y2H2 1132 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 KPNA7A9QM74 516 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 ARSAP15289 507 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 COPAP53621 1224 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 AP2B1P63010 937 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 SEMA5AQ13591 1074 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 TAPT1Q6NXT6 567 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 RNF111Q6ZNA4 994 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 BEST2Q8NFU1 509 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 KBTBD7Q8WVZ9 684 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 TMEM40Q8WWA1 233 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 DNAJB3Q8WWF6 145 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 SORT1Q99523 831 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 VCXQ9H320 206 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 LRRC4Q9HBW1 653 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 PIGVQ9NUD9 493 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 SLC39A10Q9ULF5 831 aa12.79□□□□□ -0.36
SPIN3-232ENST00000639956 DNAJC25-GNG10A0A024R161 153 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 MEIS3P2A8K0S8 358 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 DYNC1LI2O43237 492 aaPredicted RBP12.78□□□□□ -0.36
SPIN3-232ENST00000639956 SLC25A27O95847 323 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 PRKCGP05129 697 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 CPA3P15088 417 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 PEX2P28328 305 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 MAGEA3P43357 314 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 ACTR3P61158 418 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 GRAMD1BQ3KR37 738 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 RABGAP1LQ5R372 815 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 TMEM198Q66K66 360 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 SNX31Q8N9S9 440 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 USP13Q92995 863 aaPredicted RBP12.78□□□□□ -0.36
SPIN3-232ENST00000639956 OR52B2Q96RD2 323 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 ATXN3LQ9H3M9 355 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 VRTNQ9H8Y1 702 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 COG4Q9H9E3 785 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 IARS2Q9NSE4 1012 aaKnown RBP12.78□□□□□ -0.36
SPIN3-232ENST00000639956 COPG2Q9UBF2 871 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 ANGPTL2Q9UKU9 493 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 PPME1Q9Y570 386 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 TK2O00142 265 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 EEF2KO00418 725 aaKnown RBP12.78□□□□□ -0.36
SPIN3-232ENST00000639956 NRP1O14786 923 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 ZBTB14O43829 449 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 OPHN1O60890 802 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 GLRA3O75311 464 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 EPHA3P29320 983 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 SLC26A2P50443 739 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 SERPINB9P50453 376 aa12.78□□□□□ -0.36
SPIN3-232ENST00000639956 AFF1P51825 1210 aaKnown RBP12.78□□□□□ -0.36
SPIN3-232ENST00000639956 BCAT1P54687 386 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms