RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 GPR15P49685 360 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 GALNT2Q10471 571 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 PKN2Q16513 984 aaKnown RBP12.58□□□□□ -0.4
PAX6-261ENST00000639943 SDHAF4Q5VUM1 108 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 MSANTD2Q6P1R3 559 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 ANKS3Q6ZW76 656 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 ZNF567Q8N184 647 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 ATAD1Q8NBU5 361 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 SPPL2BQ8TCT7 592 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 DYDC1Q8WWB3 177 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 CFAP36Q96G28 342 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 TOX2Q96NM4 488 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 TRABDQ9H4I3 376 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 SFMBT1Q9UHJ3 866 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 SHROOM3Q8TF72 1996 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 TCRBV9S1A1TA0A576 114 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 RTN3O95197 1032 aaPredicted RBP12.58□□□□□ -0.4
PAX6-261ENST00000639943 CPP00450 1065 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 PGFP49763 221 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 COG7P83436 770 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 FAAP100Q0VG06 881 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 GPR17Q13304 367 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 ZNF534Q76KX8 674 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 SPATS2Q86XZ4 545 aaKnown RBP12.58□□□□□ -0.4
PAX6-261ENST00000639943 TP53INP2Q8IXH6 220 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 AGGF1Q8N302 714 aaeCLIP12.58□□□□□ -0.4
PAX6-261ENST00000639943 NPWQ8N729 165 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 ANKRD42Q8N9B4 389 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 MRRFQ96E11 262 aaKnown RBP12.58□□□□□ -0.4
PAX6-261ENST00000639943 SMC6Q96SB8 1091 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 PPP1R12CQ9BZL4 782 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 FAM107BQ9H098 131 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 SIK2Q9H0K1 926 aa12.58□□□□□ -0.4
PAX6-261ENST00000639943 FGF10O15520 208 aaPredicted RBP12.57□□□□□ -0.4
PAX6-261ENST00000639943 PRPF4O43172 522 aaKnown RBP eCLIP12.57□□□□□ -0.4
PAX6-261ENST00000639943 TBC1D4O60343 1298 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 PAGE1O75459 146 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 SLC2A3P11169 496 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 GARSP41250 739 aaKnown RBP12.57□□□□□ -0.4
PAX6-261ENST00000639943 SLC18A1P54219 525 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 ARPP19P56211 112 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 ZNF33AQ06730 810 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 EFTUD2Q15029 972 aaKnown RBP eCLIP12.57□□□□□ -0.4
PAX6-261ENST00000639943 RWDD4Q6NW29 188 aaKnown RBP12.57□□□□□ -0.4
PAX6-261ENST00000639943 LRRC8BQ6P9F7 803 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 PID1Q7Z2X4 250 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 CPLX4Q7Z7G2 160 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 MGARPQ8TDB4 240 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 C2orf15Q8WU43 125 aaKnown RBP12.57□□□□□ -0.4
PAX6-261ENST00000639943 DCAKDQ8WVC6 231 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 B3GALT6Q96L58 329 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 SIGLEC10Q96LC7 697 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 ZNF317Q96PQ6 595 aaPredicted RBP12.57□□□□□ -0.4
PAX6-261ENST00000639943 VAT1Q99536 393 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 EBNA1BP2Q99848 306 aaKnown RBP12.57□□□□□ -0.4
PAX6-261ENST00000639943 TTPALQ9BTX7 342 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 CATSPERBQ9H7T0 1116 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 COMMD8Q9NX08 183 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 KLHL8Q9P2G9 620 aaPredicted RBP12.57□□□□□ -0.4
PAX6-261ENST00000639943 HCSTQ9UBK5 93 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 SMG5Q9UPR3 1016 aaKnown RBP12.57□□□□□ -0.4
PAX6-261ENST00000639943 TLR6Q9Y2C9 796 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 IKBKGQ9Y6K9 419 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 GREB1Q4ZG55 1949 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 FAM92AA1XBS5 289 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 MTMR11A4FU01 709 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 FAM47DPA6NHR8 397 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 NT5C1B-RDH14C9J2C7 533 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 MSI1O43347 362 aaKnown RBP12.57□□□□□ -0.4
PAX6-261ENST00000639943 SRGAP2BP0DMP2 458 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 PTPN3P26045 913 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 YWHAQP27348 245 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 PSMB4P28070 264 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 HOXC13P31276 330 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 NRG1Q02297 640 aaPredicted RBP12.57□□□□□ -0.4
PAX6-261ENST00000639943 TLE2Q04725 743 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 DEFB128Q7Z7B8 93 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 LZTR1Q8N653 840 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 PDCD7Q8N8D1 485 aaKnown RBP12.57□□□□□ -0.4
PAX6-261ENST00000639943 TBC1D31Q96DN5 1066 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 SPATA17Q96L03 361 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 CRISPLD2Q9H0B8 497 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 OSER1Q9NX31 292 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 GMIPQ9P107 970 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 TRHDEQ9UKU6 1024 aa12.57□□□□□ -0.4
PAX6-261ENST00000639943 KCNU1A8MYU2 1149 aa12.56□□□□□ -0.4
PAX6-261ENST00000639943 KCNK1O00180 336 aa12.56□□□□□ -0.4
PAX6-261ENST00000639943 DRD4P21917 467 aa12.56□□□□□ -0.4
PAX6-261ENST00000639943 MPP2Q14168 576 aa12.56□□□□□ -0.4
PAX6-261ENST00000639943 KBTBD12Q3ZCT8 623 aa12.56□□□□□ -0.4
PAX6-261ENST00000639943 RTP2Q5QGT7 225 aa12.56□□□□□ -0.4
PAX6-261ENST00000639943 MANEALQ5VSG8 457 aa12.56□□□□□ -0.4
PAX6-261ENST00000639943 SLC44A1Q8WWI5 657 aa12.56□□□□□ -0.4
PAX6-261ENST00000639943 FBXO32Q969P5 355 aa12.56□□□□□ -0.4
PAX6-261ENST00000639943 FCRL2Q96LA5 508 aaPredicted RBP12.56□□□□□ -0.4
PAX6-261ENST00000639943 CEP41Q9BYV8 373 aa12.56□□□□□ -0.4
PAX6-261ENST00000639943 SSU72Q9NP77 194 aaKnown RBP12.56□□□□□ -0.4
PAX6-261ENST00000639943 CLIC5Q9NZA1 410 aa12.56□□□□□ -0.4
PAX6-261ENST00000639943 TTLL3Q9Y4R7 772 aa12.56□□□□□ -0.4
PAX6-261ENST00000639943 MAD1L1Q9Y6D9 718 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms