RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 LUC7LQ9NQ29 371 aaKnown RBP13.15□□□□□ -0.3
CTSD-208ENST00000636843 AIPL1Q9NZN9 384 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 MARCH2Q9P0N8 246 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 MSRB2Q9Y3D2 182 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 DAAM1Q9Y4D1 1078 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 HMBSP08397 361 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 CD59P13987 128 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 CORO1AP31146 461 aaKnown RBP13.14□□□□□ -0.31
CTSD-208ENST00000636843 MXI1P50539 228 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 NAA30Q147X3 362 aaPredicted RBP13.14□□□□□ -0.31
CTSD-208ENST00000636843 EIF4HQ15056 248 aaKnown RBP13.14□□□□□ -0.31
CTSD-208ENST00000636843 GEN1Q17RS7 908 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 ASTE1Q2TB18 679 aaPredicted RBP13.14□□□□□ -0.31
CTSD-208ENST00000636843 PLEKHG6Q3KR16 790 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 DCAF17Q5H9S7 520 aaPredicted RBP13.14□□□□□ -0.31
CTSD-208ENST00000636843 TCERG1LQ5VWI1 586 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 ARHGAP17Q68EM7 881 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 ANKS1BQ7Z6G8 1248 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 ANKRD52Q8NB46 1076 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 SLC4A11Q8NBS3 891 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 FBXL13Q8NEE6 735 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 DNASE2BQ8WZ79 361 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 SEMA4DQ92854 862 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 P2RY11Q96G91 374 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 PIWIL1Q96J94 861 aaKnown RBP13.14□□□□□ -0.31
CTSD-208ENST00000636843 CRACR2AQ9BSW2 395 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 SLC2A11Q9BYW1 496 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 ZDHHC5Q9C0B5 715 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 ITM2CQ9NQX7 267 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 CISHQ9NSE2 258 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 RAB20Q9NX57 234 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 WSB2Q9NYS7 404 aaPredicted RBP13.14□□□□□ -0.31
CTSD-208ENST00000636843 USP36Q9P275 1121 aaKnown RBP13.14□□□□□ -0.31
CTSD-208ENST00000636843 AGO1Q9UL18 857 aaKnown RBP13.14□□□□□ -0.31
CTSD-208ENST00000636843 PCDHA13Q9Y5I0 950 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 FAM208BQ5VWN6 2430 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 IGF2RP11717 2491 aa13.14□□□□□ -0.31
CTSD-208ENST00000636843 TIMM44O43615 452 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 SYNCRIPO60506 623 aaKnown RBP13.13□□□□□ -0.31
CTSD-208ENST00000636843 GJB3O75712 270 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 PLEKP08567 350 aaPredicted RBP13.13□□□□□ -0.31
CTSD-208ENST00000636843 OXTRP30559 389 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 IL12RB1P42701 662 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 RAD23BP54727 409 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 YWHAGP61981 247 aaKnown RBP eCLIP13.13□□□□□ -0.31
CTSD-208ENST00000636843 WHAMMP3Q1A5X7 153 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 ZNF423Q2M1K9 1284 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 ERCC6LQ2NKX8 1250 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 KLHDC7AQ5VTJ3 777 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 HGSNATQ68CP4 663 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 PM20D1Q6GTS8 502 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 RSRC2Q7L4I2 434 aaKnown RBP13.13□□□□□ -0.31
CTSD-208ENST00000636843 PIGZQ86VD9 579 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 DENND1CQ8IV53 801 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 CADM4Q8NFZ8 388 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 PLD4Q96BZ4 506 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 TOE1Q96GM8 510 aaKnown RBP13.13□□□□□ -0.31
CTSD-208ENST00000636843 MKRN2Q9H000 416 aaKnown RBP13.13□□□□□ -0.31
CTSD-208ENST00000636843 CD93Q9NPY3 652 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 ELOVL2Q9NXB9 296 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.13□□□□□ -0.316e-8■□□□□ 10.2
CTSD-208ENST00000636843 BZW2Q9Y6E2 419 aaKnown RBP13.13□□□□□ -0.31
CTSD-208ENST00000636843 V9GYY5 206 aaPredicted RBP13.13□□□□□ -0.31
CTSD-208ENST00000636843 PCDH15Q96QU1 1955 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 CEP192Q8TEP8 1941 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 SLC12A8A0AV02 714 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 PJA2O43164 708 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 ZBED1O96006 694 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 PON1P27169 355 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 ASIC2Q16515 512 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 TDRD12Q587J7 1177 aaKnown RBP13.13□□□□□ -0.31
CTSD-208ENST00000636843 DPY19L2P1Q6NXN4 242 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 TMPRSS6Q8IU80 811 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 FMNL3Q8IVF7 1028 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 FAM217AQ8IXS0 508 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 OR2I1PQ8NGU4 316 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 ZCCHC14Q8WYQ9 949 aaKnown RBP13.13□□□□□ -0.31
CTSD-208ENST00000636843 GOLGA1Q92805 767 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 SIPA1Q96FS4 1042 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 GPR174Q9BXC1 333 aa13.13□□□□□ -0.31
CTSD-208ENST00000636843 OLA1Q9NTK5 396 aaKnown RBP13.13□□□□□ -0.31
CTSD-208ENST00000636843 A0A1B0GTW7 788 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 FAM221BA6H8Z2 402 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 MEI4A8MW99 385 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 NCAM1P13591 858 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 UCHL3P15374 230 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 SLC9A1P19634 815 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 MAGEA1P43355 309 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 TPMTP51580 245 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 TKTL1P51854 596 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 FAM193AP78312 1265 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 RAPGEF1Q13905 1077 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 ZNF234Q14588 700 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 TRIP4Q15650 581 aaPredicted RBP13.12□□□□□ -0.31
CTSD-208ENST00000636843 LRRN4CLQ8ND94 238 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 TRIM58Q8NG06 486 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 DDI1Q8WTU0 396 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 PRCCQ92733 491 aaPredicted RBP13.12□□□□□ -0.31
CTSD-208ENST00000636843 TATDN2Q93075 761 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 SPAG5Q96R06 1193 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms