RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 Q6ZTK2 550 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 CEP68Q76N32 757 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 SLC47A2Q86VL8 602 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ZSCAN30Q86W11 494 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 SBSPONQ8IVN8 264 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 APLFQ8IW19 511 aaPredicted RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 SLFN12Q8IYM2 578 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 SPICE1Q8N0Z3 855 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ENAHQ8N8S7 591 aaPredicted RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF709Q8N972 641 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 PRPF38AQ8NAV1 312 aaKnown RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 PLA2G15Q8NCC3 412 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 TMEM116Q8NCL8 245 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 TTC16Q8NEE8 873 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF397Q8NF99 534 aaPredicted RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 OR5M3Q8NGP4 307 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 OR14A16Q8NHC5 309 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 SUN3Q8TAQ9 357 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 CLEC4DQ8WXI8 215 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 TFAP2CQ92754 450 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 INPP5DQ92835 1189 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 PTERQ96BW5 349 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 TIFAQ96CG3 184 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 NUDT16Q96DE0 195 aaKnown RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 TRMT2BQ96GJ1 504 aaKnown RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 URB1-AS1Q96HZ7 61 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 WNK4Q96J92 1243 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 SLC6A18Q96N87 628 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 C8orf37Q96NL8 207 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 CDRT15Q96T59 188 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 KIF2CQ99661 725 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF184Q99676 751 aaPredicted RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 HINFPQ9BQA5 517 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ALG8Q9BVK2 526 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 SCNM1Q9BWG6 230 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 NPLQ9BXD5 320 aaPredicted RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 TRIM34Q9BYJ4 488 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ANO3Q9BYT9 981 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ULBP2Q9BZM5 246 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 REXO4Q9GZR2 422 aaKnown RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 EHD4Q9H223 541 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 MRPL46Q9H2W6 279 aaKnown RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 EPS8L2Q9H6S3 715 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 PLAC1Q9HBJ0 212 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 PCDH9Q9HC56 1237 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 SLC52A3Q9NQ40 469 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 NIT2Q9NQR4 276 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 SIRT3Q9NTG7 399 aaPredicted RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ING3Q9NXR8 418 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 EHD3Q9NZN3 535 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 STOX2Q9P2F5 926 aaPredicted RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ARHGAP28Q9P2N2 729 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 USP25Q9UHP3 1055 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 CPA4Q9UI42 421 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 DENND2AQ9ULE3 1009 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 EXO1Q9UQ84 846 aaKnown RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 PLAAQ9Y263 795 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 DNAJC16Q9Y2G8 782 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 PLEKHA6Q9Y2H5 1048 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 C2CD2Q9Y426 696 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 PCDHB12Q9Y5F1 795 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 X6R8D5 127 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 RTTNQ86VV8 2226 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 ASXL3Q9C0F0 2248 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 PRRC2CQ9Y520 2896 aaKnown RBP-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 TRBV23OR9-2A0A075B6M9 112 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 IGHV3OR16-10A0A075B7F0 116 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 A0A087WWV3 80 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 TMEM238LA0A1B0GVL6 79 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 A0A1W2PPK0 400 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 MFSD2BA6NFX1 497 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 SMIM1B2RUZ4 78 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 TRIM49D1C9J1S8 452 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 KRIT1O00522 736 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 DVL1O14640 695 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 NRP1O14786 923 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 SLC27A2O14975 620 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 CTAGE5O15320 804 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 CCP110O43303 1012 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 ADCY6O43306 1168 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF861PO60384 105 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 MAGEC1O60732 1142 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 N4BP1O75113 896 aaKnown RBP-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 DAB1O75553 588 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 STAM2O75886 525 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 FAM155BO75949 473 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 STBD1O95210 358 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 VNN2O95498 520 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 BCL10O95999 233 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 HPRP00739 348 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 AFPP02771 609 aaKnown RBP-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 CYP1A2P05177 515 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 RHOP08100 348 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 SBK3P0C264 359 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 ERVK-10P10266 1014 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF250P15622 560 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 PAX1P15863 534 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 UGT1A4P22310 534 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 GATA3P23771 443 aa-0.92□□□□□ -2.56
CDKL5-210ENST00000636046 RBMS1P29558 406 aaKnown RBP-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms