RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 PSEN1P49768 467 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 KCNC3Q14003 757 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 SMTNL2Q2TAL5 461 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 RNF187Q5TA31 235 aaPredicted RBP20.57■□□□□ 0.88
CLN8-208ENST00000635751 BBS12Q6ZW61 710 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 BEND5Q7L4P6 421 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 PDZD8Q8NEN9 1154 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 ADAM32Q8TC27 787 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 FAM172AQ8WUF8 416 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 OVCA2Q8WZ82 227 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 NT5C3BQ969T7 300 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 LRCH3Q96II8 777 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 C9orf72Q96LT7 481 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 NPY6RQ99463 290 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 TRIM62Q9BVG3 475 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 SAYSD1Q9NPB0 183 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 UXTQ9UBK9 157 aaPredicted RBP20.57■□□□□ 0.88
CLN8-208ENST00000635751 HYAL1Q12794 435 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 RIBC1Q8N443 379 aaPredicted RBP20.57■□□□□ 0.88
CLN8-208ENST00000635751 RNF139Q8WU17 664 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 CENPIQ92674 756 aaPredicted RBP20.57■□□□□ 0.88
CLN8-208ENST00000635751 CORO1BQ9BR76 489 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 TMEM121Q9BTD3 319 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 LRRC3Q9BY71 257 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.57■□□□□ 0.88
CLN8-208ENST00000635751 HCFC1R1Q9NWW0 138 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 CLIC5Q9NZA1 410 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 TRPM5Q9NZQ8 1165 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 CTNNAL1Q9UBT7 734 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 SHOC2Q9UQ13 582 aa20.57■□□□□ 0.88
CLN8-208ENST00000635751 SYNJ2BP-COX16A0A087WUM0 186 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 CCDC195A0A1B0GUA6 201 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 ZNF840PA6NDX5 716 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 M0QYT0 321 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 FSBPO95073 299 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 F11P03951 625 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 HNRNPA1P09651 372 aaKnown RBP eCLIP20.56■□□□□ 0.88
CLN8-208ENST00000635751 ETS1P14921 441 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 HOXA9P31269 272 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 ATXN1P54253 815 aaKnown RBP20.56■□□□□ 0.88
CLN8-208ENST00000635751 KCNT1Q5JUK3 1230 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 RNASEH2BQ5TBB1 312 aaKnown RBP20.56■□□□□ 0.88
CLN8-208ENST00000635751 OTUD1Q5VV17 481 aaPredicted RBP20.56■□□□□ 0.88
CLN8-208ENST00000635751 ELMSAN1Q6PJG2 1045 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 CCDC121Q6ZUS5 278 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 PCGF5Q86SE9 256 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 TMEM150AQ86TG1 271 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 TMC8Q8IU68 726 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 C12orf76Q8N812 135 aaPredicted RBP20.56■□□□□ 0.88
CLN8-208ENST00000635751 FAM161BQ96MY7 647 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 IL21Q9HBE4 155 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 LMCD1Q9NZU5 365 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 COX16Q9P0S2 106 aa20.56■□□□□ 0.88
CLN8-208ENST00000635751 TMEM120BA0PK00 339 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 CST8O60676 142 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 PECAM1P16284 738 aaPredicted RBP20.55■□□□□ 0.88
CLN8-208ENST00000635751 DESP17661 470 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 HDAC4P56524 1084 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 OTUD4Q01804 1114 aaKnown RBP20.55■□□□□ 0.88
CLN8-208ENST00000635751 NME3Q13232 169 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 TTC31Q49AM3 519 aaPredicted RBP20.55■□□□□ 0.88
CLN8-208ENST00000635751 ACTL9Q8TC94 416 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 DQX1Q8TE96 717 aaKnown RBP20.55■□□□□ 0.88
CLN8-208ENST00000635751 CASP10Q92851 521 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 PRKD2Q9BZL6 878 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 NSRP1Q9H0G5 558 aaKnown RBP20.55■□□□□ 0.88
CLN8-208ENST00000635751 CCSER2Q9H7U1 834 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 ZDHHC7Q9NXF8 308 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 RRN3Q9NYV6 651 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 SFMBT1Q9UHJ3 866 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 LINC01565O15544 149 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 TRUB2O95900 331 aaKnown RBP20.55■□□□□ 0.88
CLN8-208ENST00000635751 TBX18O95935 607 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 PTPN2P17706 415 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 GABRR2P28476 465 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 MIPP30301 263 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 RDXP35241 583 aaKnown RBP20.55■□□□□ 0.88
CLN8-208ENST00000635751 DYNLT1P63172 113 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 SLC20A2Q08357 652 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 SNX30Q5VWJ9 437 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 SCYL2Q6P3W7 929 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 STRADAQ7RTN6 431 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 KCTD6Q8NC69 237 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 CMASQ8NFW8 434 aaPredicted RBP20.55■□□□□ 0.88
CLN8-208ENST00000635751 DYDC1Q8WWB3 177 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 ASAH2Q9NR71 780 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 DNMT3BQ9UBC3 853 aaKnown RBP20.55■□□□□ 0.88
CLN8-208ENST00000635751 PCSK1NQ9UHG2 260 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 ACTL7BQ9Y614 415 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 MTCH2Q9Y6C9 303 aa20.55■□□□□ 0.88
CLN8-208ENST00000635751 TLR5O60602 858 aa20.54■□□□□ 0.88
CLN8-208ENST00000635751 XYLBO75191 536 aa20.54■□□□□ 0.88
CLN8-208ENST00000635751 ENDOD1O94919 500 aa20.54■□□□□ 0.88
CLN8-208ENST00000635751 IFNB1P01574 187 aa20.54■□□□□ 0.88
CLN8-208ENST00000635751 MYL4P12829 197 aa20.54■□□□□ 0.88
CLN8-208ENST00000635751 PCK1P35558 622 aa20.54■□□□□ 0.88
CLN8-208ENST00000635751 PPP3CCP48454 512 aa20.54■□□□□ 0.88
CLN8-208ENST00000635751 DEUP1Q05D60 604 aa20.54■□□□□ 0.88
CLN8-208ENST00000635751 ADGRE1Q14246 886 aa20.54■□□□□ 0.88
CLN8-208ENST00000635751 PABPC1LQ4VXU2 614 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms