RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 UBE3BQ7Z3V4 1068 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 USP37Q86T82 979 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 ANKRD18AQ8IVF6 992 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 YAF2Q8IY57 180 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 GPC2Q8N158 579 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC15A4Q8N697 577 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 PCSK9Q8NBP7 692 aaKnown RBP2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 OR56A3Q8NH54 315 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 MUL1Q969V5 352 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 SPSB4Q96A44 273 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 C18orf8Q96DM3 657 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 FBXL20Q96IG2 436 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 NELL2Q99435 816 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 PAGR1Q9BTK6 254 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 MAGEB5Q9BZ81 275 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 TINAGL1Q9GZM7 467 aaPredicted RBP2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 MAGEH1Q9H213 219 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 TMEM8AQ9HCN3 771 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 OBP2BQ9NPH6 170 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 XPNPEP3Q9NQH7 507 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 DACT1Q9NYF0 836 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 C9orf78Q9NZ63 289 aaPredicted RBP2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 RGL1Q9NZL6 768 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 ZNF212Q9UDV6 495 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 PNMA2Q9UL42 364 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC45A2Q9UMX9 530 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 TMX2Q9Y320 296 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 RNF123Q5XPI4 1314 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 MAP3K15Q6ZN16 1313 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 SPEF2Q9C093 1822 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 CASP8AP2Q9UKL3 1982 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 WDR27A2RRH5 827 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 FAM234BA2RU67 622 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 LGALS16A8MUM7 142 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 TMEM233B4DJY2 109 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 ERVV-1B6SEH8 477 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 M0R3H8 397 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 ACKR2O00590 384 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 PODXLO00592 558 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 AGFG2O95081 481 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 CHRM2P08172 466 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 IDEP14735 1019 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 BTF3P20290 206 aaKnown RBP2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 GABRB3P28472 473 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 PPP2R1AP30153 589 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 EPHX2P34913 555 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 SERPINF1P36955 418 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 VIPR2P41587 438 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 PIP4K2AP48426 406 aaPredicted RBP2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 CTCFP49711 727 aaPredicted RBP2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 ZNF135P52742 658 aaPredicted RBP2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 COPAP53621 1224 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 TEFQ10587 303 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 PRKG1Q13976 671 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 MAPRE1Q15691 268 aaKnown RBP2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 RAB30Q15771 203 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 CC2D1BQ5T0F9 858 aaKnown RBP2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 DCAF12L1Q5VU92 463 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 FAM160B1Q5W0V3 765 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 ARL6IP4Q66PJ3 421 aaKnown RBP2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 FBXO38Q6PIJ6 1188 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 LVRNQ6Q4G3 990 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 RFX8Q6ZV50 586 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 MCM10Q7L590 875 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 PPP1R32Q7Z5V6 425 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 NBPF5PQ86XG9 351 aaPredicted RBP2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 GAS2L3Q86XJ1 694 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 KRT73Q86Y46 540 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 ZNF34Q8IZ26 560 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 TTC5Q8N0Z6 440 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 MPP5Q8N3R9 675 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 GALNT15Q8N3T1 639 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 FITM2Q8N6M3 262 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 TEX19Q8NA77 164 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 ATG16L2Q8NAA4 619 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 GLIS1Q8NBF1 620 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 CCDC150Q8NCX0 1101 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 TMIEQ8NEW7 156 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 FAM71BQ8TC56 605 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 EID2BQ96D98 161 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 LRRC46Q96FV0 321 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 SNX27Q96L92 541 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 KLHL32Q96NJ5 620 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 CNPPD1Q9BV87 410 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 STK31Q9BXU1 1019 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 MS4A7Q9GZW8 240 aaPredicted RBP2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 DHX36Q9H2U1 1008 aaKnown RBP2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 TBC1D23Q9NUY8 699 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 XPR1Q9UBH6 696 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 GRHPRQ9UBQ7 328 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 HACL1Q9UJ83 578 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 GJD2Q9UKL4 321 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 ITGB1BP2Q9UKP3 347 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 CAPN11Q9UMQ6 739 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 AGAP1Q9UPQ3 857 aa2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 LRRFIP2Q9Y608 721 aaKnown RBP2.85□□□□□ -1.95
SMARCB1-208ENST00000634926 CHD9Q3L8U1 2897 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 SSC5DA1L4H1 1573 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 AKAP11Q9UKA4 1901 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 A0A087WZ62 844 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms