RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 CACNG3O60359 315 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 TBL1XO60907 577 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 MFAP3LO75121 409 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 ATG13O75143 517 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 RTN2O75298 545 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 TULP3O75386 442 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 KAT7O95251 611 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 GJB6O95452 261 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 IGLV3-27P01718 113 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 FTLP02792 175 aaPredicted RBP7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 FYNP06241 537 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 GPD1P21695 349 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 GPC1P35052 558 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 RDXP35241 583 aaKnown RBP7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 FLT3P36888 993 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 OPRD1P41143 372 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 GRIA2P42262 883 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 RPS9P46781 194 aaKnown RBP7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 SLC6A11P48066 632 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 CCR3P51677 355 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 ZNF75DP51815 510 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 PITX1P78337 314 aaPredicted RBP7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 GAS6Q14393 721 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 ARL13BQ3SXY8 428 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 SLC25A52Q3SY17 297 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 C2orf27AQ580R0 203 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 BRMS1LQ5PSV4 323 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 RABGAP1LQ5R372 815 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 E4F1Q66K89 784 aaPredicted RBP7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 RAP1GAP2Q684P5 730 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 NAIF1Q69YI7 327 aaPredicted RBP7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 SDE2Q6IQ49 451 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 FSTL4Q6MZW2 842 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 SCYL2Q6P3W7 929 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 RFWD3Q6PCD5 774 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 LRRC31Q6UY01 552 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 RIPOR1Q6ZS17 1223 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 Q6ZS52 159 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 MON1BQ7L1V2 547 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 CYP2U1Q7Z449 544 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 C12orf40Q86WS4 652 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 MFN1Q8IWA4 741 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 MCOLN2Q8IZK6 566 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 CARNMT1Q8N4J0 409 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 ZNF557Q8N988 423 aaPredicted RBP7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 RPLP0P6Q8NHW5 317 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 UCMAQ8WVF2 138 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 RXFP2Q8WXD0 754 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 FCRL2Q96LA5 508 aaPredicted RBP7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 RPRD1AQ96P16 312 aaPredicted RBP7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 NPY6RQ99463 290 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 CIPCQ9C0C6 399 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 SIK2Q9H0K1 926 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 IRF2BPLQ9H1B7 796 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 CHRDQ9H2X0 955 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 WDCPQ9H6R7 721 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 MRPL47Q9HD33 250 aaKnown RBP7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 ABHD10Q9NUJ1 306 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 PARVAQ9NVD7 372 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 TMEM51Q9NW97 253 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 CNOT8Q9UFF9 292 aaKnown RBP7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 ADAMTS1Q9UHI8 967 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 SLC8A2Q9UPR5 921 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 SCINQ9Y6U3 715 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 KIAA1549LQ6ZVL6 1849 aa7.48□□□□□ -1.21
NPLOC4-221ENST00000625705 TECTAO75443 2155 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 GOLGA6L7A0A1B0GV03 622 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 KCNU1A8MYU2 1149 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 DDX3XO00571 662 aaKnown RBP eCLIP7.47□□□□□ -1.217e-9■■□□□ 13.3
NPLOC4-221ENST00000625705 GREM1O60565 184 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 RNF8O76064 485 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 IPO7O95373 1038 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 PLEKP08567 350 aaPredicted RBP7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 MYBL1P10243 752 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 CHRNB1P11230 501 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 GZMAP12544 262 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 TACR2P21452 398 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 RRM1P23921 792 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 PSMA2P25787 234 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 EIF4A3P38919 411 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 SSR1P43307 286 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 CXCL12P48061 93 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 ADKP55263 362 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 CSTF1Q05048 431 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 MTAPQ13126 283 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 E2F5Q15329 346 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 ANGPT1Q15389 498 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 C15orf59Q2T9L4 293 aaPredicted RBP7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 CCDC122Q5T0U0 273 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 TTC39BQ5VTQ0 682 aaPredicted RBP7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 TRMT11Q7Z4G4 463 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 ANKS1BQ7Z6G8 1248 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 FAM131BQ86XD5 332 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 GAS2L3Q86XJ1 694 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 C1orf210Q8IVY1 113 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 CFAP52Q8N1V2 620 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 SYNPOQ8N3V7 929 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 CCDC33Q8N5R6 958 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 ZNF513Q8N8E2 541 aaPredicted RBP7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 TERB1Q8NA31 727 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms