RNA–Protein interactions for RNA: ENST00000625664.2

USP8-219, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5 BASIC

Gene USP8, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-219ENST00000625664 GGCXP38435 758 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 STAT1P42224 750 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 MATKP42679 507 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 PTGER3P43115 390 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 GABRB2P47870 512 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 FMO1Q01740 532 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 CDR2Q01850 454 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 CDH18Q13634 790 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 PUM1Q14671 1186 aaKnown RBP eCLIP13.04□□□□□ -0.32
USP8-219ENST00000625664 E2F5Q15329 346 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 OTUD1Q5VV17 481 aaPredicted RBP13.04□□□□□ -0.32
USP8-219ENST00000625664 MMS22LQ6ZRQ5 1243 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 CIR1Q86X95 450 aaPredicted RBP13.04□□□□□ -0.32
USP8-219ENST00000625664 CCDC117Q8IWD4 279 aaPredicted RBP13.04□□□□□ -0.32
USP8-219ENST00000625664 DHX40Q8IX18 779 aaKnown RBP13.04□□□□□ -0.32
USP8-219ENST00000625664 ZNF557Q8N988 423 aaPredicted RBP13.04□□□□□ -0.32
USP8-219ENST00000625664 MSANTD4Q8NCY6 345 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 FIBINQ8TAL6 211 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 PIGKQ92643 395 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 ERGIC2Q96RQ1 377 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 ADAM33Q9BZ11 813 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 MKRN2Q9H000 416 aaKnown RBP13.04□□□□□ -0.32
USP8-219ENST00000625664 PRDM16Q9HAZ2 1276 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 VPS45Q9NRW7 570 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 RXFP3Q9NSD7 469 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 DLL3Q9NYJ7 618 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.04□□□□□ -0.32
USP8-219ENST00000625664 PLA2G4CQ9UP65 541 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 CACNA1AO00555 2505 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 LAMA1P25391 3075 aa13.04□□□□□ -0.32
USP8-219ENST00000625664 H0Y626 953 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 LUC7L3O95232 432 aaKnown RBP13.03□□□□□ -0.32
USP8-219ENST00000625664 PTMAP06454 111 aaKnown RBP13.03□□□□□ -0.32
USP8-219ENST00000625664 POLR2EP19388 210 aaKnown RBP13.03□□□□□ -0.32
USP8-219ENST00000625664 CSKP41240 450 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 SULT1E1P49888 294 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 RPL6Q02878 288 aaKnown RBP13.03□□□□□ -0.32
USP8-219ENST00000625664 IQCB1Q15051 598 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 FSCBQ5H9T9 825 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 PHLDB2Q86SQ0 1253 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 ZNF677Q86XU0 584 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 LMLNQ96KR4 655 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 NPY6RQ99463 290 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 BPIFA3Q9BQP9 254 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 INTS6Q9UL03 887 aaKnown RBP13.03□□□□□ -0.32
USP8-219ENST00000625664 STAP1Q9ULZ2 295 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 DAAM1Q9Y4D1 1078 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 CKAP5Q14008 2032 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 MUC22E2RYF6 1773 aaPredicted RBP13.03□□□□□ -0.32
USP8-219ENST00000625664 SMTNL1A8MU46 457 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 TEX33O43247 280 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 FOXD2O60548 495 aaPredicted RBP13.03□□□□□ -0.32
USP8-219ENST00000625664 ZNF217O75362 1048 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 ATP5BP06576 529 aaKnown RBP13.03□□□□□ -0.32
USP8-219ENST00000625664 DLDP09622 509 aaKnown RBP13.03□□□□□ -0.32
USP8-219ENST00000625664 FLT3P36888 993 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 NUMBP49757 651 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 ZNF165P49910 485 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 ATXN1P54253 815 aaKnown RBP13.03□□□□□ -0.32
USP8-219ENST00000625664 CENPCQ03188 943 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 PTPRNQ16849 979 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 SLC36A4Q6YBV0 504 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 DGLUCYQ7Z3D6 616 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 TMPRSS6Q8IU80 811 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 SLC30A5Q8TAD4 765 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 NETO1Q8TDF5 533 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 SIPA1Q96FS4 1042 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 ZNF830Q96NB3 372 aaPredicted RBP13.03□□□□□ -0.32
USP8-219ENST00000625664 TBCBQ99426 244 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 PRMT1Q99873 361 aaKnown RBP13.03□□□□□ -0.32
USP8-219ENST00000625664 TMEM245Q9H330 911 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 PIGVQ9NUD9 493 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 RRN3Q9NYV6 651 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 VANGL2Q9ULK5 521 aa13.03□□□□□ -0.32
USP8-219ENST00000625664 ATXN2Q99700 1313 aaKnown RBP13.02□□□□□ -0.32
USP8-219ENST00000625664 PATE3B3GLJ2 98 aa13.02□□□□□ -0.33
USP8-219ENST00000625664 PAGE1O75459 146 aa13.02□□□□□ -0.33
USP8-219ENST00000625664 CYP1A1P04798 512 aaPredicted RBP13.02□□□□□ -0.33
USP8-219ENST00000625664 SDHBP21912 280 aa13.02□□□□□ -0.33
USP8-219ENST00000625664 SCNN1AP37088 669 aa13.02□□□□□ -0.33
USP8-219ENST00000625664 IRAK1P51617 712 aa13.02□□□□□ -0.33
USP8-219ENST00000625664 COPAP53621 1224 aa13.02□□□□□ -0.33
USP8-219ENST00000625664 DEUP1Q05D60 604 aa13.02□□□□□ -0.33
USP8-219ENST00000625664 AUHQ13825 339 aaKnown RBP13.02□□□□□ -0.33
USP8-219ENST00000625664 PITRM1Q5JRX3 1037 aa13.02□□□□□ -0.33
USP8-219ENST00000625664 RABGAP1LQ5R372 815 aa13.02□□□□□ -0.33
USP8-219ENST00000625664 LYSMD4Q5XG99 296 aa13.02□□□□□ -0.33
USP8-219ENST00000625664 TRNP1Q6NT89 227 aa13.02□□□□□ -0.33
USP8-219ENST00000625664 FBXL22Q6P050 247 aa13.02□□□□□ -0.33
USP8-219ENST00000625664 PRCCQ92733 491 aaPredicted RBP13.02□□□□□ -0.33
USP8-219ENST00000625664 IGSF8Q969P0 613 aa13.02□□□□□ -0.33
USP8-219ENST00000625664 RPRD1AQ96P16 312 aaPredicted RBP13.02□□□□□ -0.33
USP8-219ENST00000625664 PCDHB18PQ96TA0 734 aa13.02□□□□□ -0.33
USP8-219ENST00000625664 C11orf70Q9BRQ4 267 aa13.02□□□□□ -0.33
USP8-219ENST00000625664 SIK2Q9H0K1 926 aa13.02□□□□□ -0.33
USP8-219ENST00000625664 MTG2Q9H4K7 406 aa13.02□□□□□ -0.33
USP8-219ENST00000625664 METTL5Q9NRN9 209 aaKnown RBP13.02□□□□□ -0.33
USP8-219ENST00000625664 SEPT11Q9NVA2 429 aaKnown RBP13.02□□□□□ -0.33
USP8-219ENST00000625664 KIAA1522Q9P206 1035 aaPredicted RBP13.02□□□□□ -0.33
USP8-219ENST00000625664 ZKSCAN5Q9Y2L8 839 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms