RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 TPH1P17752 444 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 SYT1P21579 422 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 PDIA3P30101 505 aaKnown RBP4.52□□□□□ -1.69
ATRX-209ENST00000623242 KIF5BP33176 963 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 ME1P48163 572 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 ALDH9A1P49189 494 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 GMPSP49915 693 aaPredicted RBP4.52□□□□□ -1.69
ATRX-209ENST00000623242 GNAQP50148 359 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 COPAP53621 1224 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 MECOMQ03112 1051 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 CXCL9Q07325 125 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 GALNT1Q10472 559 aaPredicted RBP4.52□□□□□ -1.69
ATRX-209ENST00000623242 FHL3Q13643 280 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 TRIM14Q14142 442 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 DLGAP5Q15398 846 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 LY6KQ17RY6 165 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 GRAMD1BQ3KR37 738 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 LSM12Q3MHD2 195 aaKnown RBP4.52□□□□□ -1.69
ATRX-209ENST00000623242 DNTTIP2Q5QJE6 756 aaKnown RBP4.52□□□□□ -1.69
ATRX-209ENST00000623242 MANEALQ5VSG8 457 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 ICE2Q659A1 982 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 RAP1GAP2Q684P5 730 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 VWA1Q6PCB0 445 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 LNX2Q8N448 690 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 MYCBPAPQ8TBZ2 947 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 KCNG4Q8TDN1 519 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 IPO4Q8TEX9 1081 aaKnown RBP4.52□□□□□ -1.69
ATRX-209ENST00000623242 ZNF384Q8TF68 577 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 ATG4AQ8WYN0 398 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 TEKT1Q969V4 418 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 CCDC47Q96A33 483 aaKnown RBP4.52□□□□□ -1.69
ATRX-209ENST00000623242 PTCD3Q96EY7 689 aaKnown RBP4.52□□□□□ -1.69
ATRX-209ENST00000623242 C8orf76Q96K31 380 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 FAM227BQ96M60 508 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 SDF4Q9BRK5 362 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 ACTRT3Q9BYD9 372 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 MAGEB5Q9BZ81 275 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 TRIM5Q9C035 493 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 TNMDQ9H2S6 317 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 SERHL2Q9H4I8 314 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 VEZTQ9HBM0 779 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 HEYLQ9NQ87 328 aaPredicted RBP4.52□□□□□ -1.69
ATRX-209ENST00000623242 AATFQ9NY61 560 aaKnown RBP eCLIP4.52□□□□□ -1.69
ATRX-209ENST00000623242 RGL1Q9NZL6 768 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 IGSF9Q9P2J2 1179 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 NOL7Q9UMY1 257 aaKnown RBP4.52□□□□□ -1.69
ATRX-209ENST00000623242 LRCH1Q9Y2L9 728 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 CEP83Q9Y592 693 aa4.52□□□□□ -1.69
ATRX-209ENST00000623242 PDS5AQ29RF7 1337 aaKnown RBP4.51□□□□□ -1.69
ATRX-209ENST00000623242 FAM205AQ6ZU69 1335 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 ZNF541Q9H0D2 1346 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 LOC102724159A0A0B4J2E5 919 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 PIPSLA2A3N6 862 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 ZAR1LA6NP61 321 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 YDJCA8MPS7 323 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 SMTNL1A8MU46 457 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 E7EWF7 191 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 IFIT3O14879 490 aaKnown RBP4.51□□□□□ -1.69
ATRX-209ENST00000623242 ZBTB43O43298 467 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 FIBPO43427 364 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 PROM1O43490 865 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 EIF3JO75822 258 aaKnown RBP4.51□□□□□ -1.69
ATRX-209ENST00000623242 DDNO94850 711 aaPredicted RBP4.51□□□□□ -1.69
ATRX-209ENST00000623242 MBD4O95243 580 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 VNN1O95497 513 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 HSPD1P10809 573 aaKnown RBP4.51□□□□□ -1.69
ATRX-209ENST00000623242 ITGAMP11215 1152 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 HGFP14210 728 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 RPS12P25398 132 aaKnown RBP4.51□□□□□ -1.69
ATRX-209ENST00000623242 ATICP31939 592 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 PTGS2P35354 604 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 BTDP43251 543 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 METAP2P50579 478 aaKnown RBP eCLIP4.51□□□□□ -1.69
ATRX-209ENST00000623242 PRKAG1P54619 331 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 E2F2Q14209 437 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 STARD3Q14849 445 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 WTAPQ15007 396 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 STK38Q15208 465 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 PWP2Q15269 919 aaKnown RBP4.51□□□□□ -1.69
ATRX-209ENST00000623242 RAB30Q15771 203 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 ZSCAN23Q3MJ62 389 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 SFRP4Q6FHJ7 346 aaPredicted RBP4.51□□□□□ -1.69
ATRX-209ENST00000623242 CCDC174Q6PII3 467 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 MAVSQ7Z434 540 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 SLC15A3Q8IY34 581 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 ZNF444Q8N0Y2 327 aaPredicted RBP4.51□□□□□ -1.69
ATRX-209ENST00000623242 GPC2Q8N158 579 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 AGBL3Q8NEM8 1001 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 ANKRD20A12PQ8NF67 263 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 CTCFLQ8NI51 663 aaPredicted RBP4.51□□□□□ -1.69
ATRX-209ENST00000623242 PROKR1Q8TCW9 393 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 CCDC12Q8WUD4 166 aaPredicted RBP4.51□□□□□ -1.69
ATRX-209ENST00000623242 ZBTB45Q96K62 511 aaPredicted RBP4.51□□□□□ -1.69
ATRX-209ENST00000623242 Q96MF0 132 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 ZNF747Q9BV97 191 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 TPSD1Q9BZJ3 242 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 MMRN2Q9H8L6 949 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 PPCSQ9HAB8 311 aa4.51□□□□□ -1.69
ATRX-209ENST00000623242 RBM28Q9NW13 759 aaKnown RBP4.51□□□□□ -1.69
ATRX-209ENST00000623242 VPS51Q9UID3 782 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms