RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 ZNF567Q8N184 647 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 PPFIBP2Q8ND30 876 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 FBXO27Q8NI29 283 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 PPP1R14CQ8TAE6 165 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 SCG3Q8WXD2 468 aaKnown RBP9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 WNT8BQ93098 351 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 FAM161BQ96MY7 647 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 RILPQ96NA2 401 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 FAM167BQ9BTA0 163 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 ABHD16BQ9H3Z7 469 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 PRDM12Q9H4Q4 367 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 LRRC40Q9H9A6 602 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 CASS4Q9NQ75 786 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 SYBUQ9NX95 663 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 COL4A4P53420 1690 aaPredicted RBP9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 ERI2A8K979 691 aaKnown RBP9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 TMEM114B3SHH9 223 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 EEF2KO00418 725 aaKnown RBP9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 ZNF195O14628 629 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 GABRDO14764 452 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 NCAM2O15394 837 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 MAP3K7O43318 606 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 AP2A1O95782 977 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 MPOP05164 745 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 C6orf222P0C671 652 aaPredicted RBP9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 LINGO3P0C6S8 592 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 KITP10721 976 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 CYP2C9P11712 490 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 NPR3P17342 541 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 PTPN1P18031 435 aaKnown RBP9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 MX2P20592 715 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 PAX7P23759 505 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 SPRP35270 261 aaPredicted RBP9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 ADRA1BP35368 520 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 CPA2P48052 419 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 NPY2RP49146 381 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 IDH3AP50213 366 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 ZNF135P52742 658 aaPredicted RBP9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 ALDH18A1P54886 795 aaKnown RBP9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 CSE1LP55060 971 aaKnown RBP9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 ABCE1P61221 599 aaKnown RBP9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 PITX1P78337 314 aaPredicted RBP9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 ADAM17P78536 824 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 DEUP1Q05D60 604 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 SOX4Q06945 474 aaPredicted RBP9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 KLC1Q07866 573 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 ADIGQ0VDE8 80 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 GRB14Q14449 540 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 FNDC1Q4ZHG4 1894 aaPredicted RBP9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 ZNF618Q5T7W0 954 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 KCTD11Q693B1 232 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 CASC4Q6P4E1 433 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 PGM2L1Q6PCE3 622 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 RIPOR1Q6ZS17 1223 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 ZCCHC23Q6ZST2 131 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 RFX8Q6ZV50 586 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 KLHDC8BQ8IXV7 354 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 CCDC33Q8N5R6 958 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 B3GALNT2Q8NCR0 500 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 MICAL1Q8TDZ2 1067 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 PPP4R1Q8TF05 950 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 STON2Q8WXE9 905 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 SLC10A4Q96EP9 437 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 PGAP3Q96FM1 320 aaPredicted RBP9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 CERS2Q96G23 380 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 MAML3Q96JK9 1138 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 PANX3Q96QZ0 392 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 SORT1Q99523 831 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 OSMRQ99650 979 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 RBBP8Q99708 897 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 GORASP1Q9BQQ3 440 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 EBF4Q9BQW3 602 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 APOL6Q9BWW8 343 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 FAM49AQ9H0Q0 323 aaPredicted RBP9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 DDX43Q9NXZ2 648 aaKnown RBP9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 TMEM216Q9P0N5 145 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 COPG2Q9UBF2 871 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 SOX13Q9UN79 622 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 APOBEC2Q9Y235 224 aaKnown RBP9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 HES2Q9Y543 173 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 NR2E3Q9Y5X4 410 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 PSAT1Q9Y617 370 aa9.86□□□□□ -0.83
IGHV3-54-201ENST00000622166 A0A088AWK7 358 aa9.85□□□□□ -0.83
IGHV3-54-201ENST00000622166 MAGEB16A2A368 324 aa9.85□□□□□ -0.83
IGHV3-54-201ENST00000622166 M0QYT0 321 aa9.85□□□□□ -0.83
IGHV3-54-201ENST00000622166 HAS3O00219 553 aa9.85□□□□□ -0.83
IGHV3-54-201ENST00000622166 PDHXO00330 501 aa9.85□□□□□ -0.83
IGHV3-54-201ENST00000622166 PSMD3O43242 534 aa9.85□□□□□ -0.83
IGHV3-54-201ENST00000622166 MTSS1O43312 755 aa9.85□□□□□ -0.83
IGHV3-54-201ENST00000622166 CCNT2O60583 730 aaKnown RBP9.85□□□□□ -0.83
IGHV3-54-201ENST00000622166 H2AFYO75367 372 aaKnown RBP9.85□□□□□ -0.83
IGHV3-54-201ENST00000622166 LYPLA1O75608 230 aaPredicted RBP9.85□□□□□ -0.83
IGHV3-54-201ENST00000622166 TOP3BO95985 862 aaKnown RBP9.85□□□□□ -0.83
IGHV3-54-201ENST00000622166 F2P00734 622 aa9.85□□□□□ -0.83
IGHV3-54-201ENST00000622166 RALBP11234 206 aa9.85□□□□□ -0.83
IGHV3-54-201ENST00000622166 CPA3P15088 417 aa9.85□□□□□ -0.83
IGHV3-54-201ENST00000622166 ANPEPP15144 967 aa9.85□□□□□ -0.83
IGHV3-54-201ENST00000622166 CYP2B6P20813 491 aa9.85□□□□□ -0.83
IGHV3-54-201ENST00000622166 AKAP5P24588 427 aa9.85□□□□□ -0.83
IGHV3-54-201ENST00000622166 DNAJB1P25685 340 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms