RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 PLXNB2O15031 1838 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 DCAF8L1A6NGE4 600 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 HCRTO43612 131 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 ASLP04424 464 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 CYP2C8P10632 490 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 GOT1P17174 413 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 HOXA11P31270 313 aaPredicted RBP8.32□□□□□ -1.08
GDNF-208ENST00000620847 TUBB3Q13509 450 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 TMEM259Q4ZIN3 620 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 FASTKD1Q53R41 847 aaKnown RBP8.32□□□□□ -1.08
GDNF-208ENST00000620847 MAP3K21Q5TCX8 1036 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 AAGABQ6PD74 315 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 ZNF410Q86VK4 478 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 HACE1Q8IYU2 909 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 OR6B3Q8NGW1 331 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 ARNTL2Q8WYA1 636 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 NMD3Q96D46 503 aaKnown RBP8.32□□□□□ -1.08
GDNF-208ENST00000620847 MPP4Q96JB8 637 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 ZNF778Q96MU6 729 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 PANX3Q96QZ0 392 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 EBF4Q9BQW3 602 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 EBF3Q9H4W6 596 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 EIF2B3Q9NR50 452 aaKnown RBP8.32□□□□□ -1.08
GDNF-208ENST00000620847 SNTG2Q9NY99 539 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 CIDEBQ9UHD4 219 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 SORCS3Q9UPU3 1222 aa8.32□□□□□ -1.08
GDNF-208ENST00000620847 RBM47A0AV96 593 aaKnown RBP8.31□□□□□ -1.08
GDNF-208ENST00000620847 ITGA2BP08514 1039 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 FGF3P11487 239 aaPredicted RBP8.31□□□□□ -1.08
GDNF-208ENST00000620847 CCDC130P13994 396 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 BCAT1P54687 386 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 ALDH18A1P54886 795 aaKnown RBP8.31□□□□□ -1.08
GDNF-208ENST00000620847 IRX4P78413 519 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 KDSRQ06136 332 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 HNRNPDQ14103 355 aaKnown RBP8.31□□□□□ -1.08
GDNF-208ENST00000620847 MDH1BQ5I0G3 518 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 PACS1Q6VY07 963 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 STRADAQ7RTN6 431 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 ADGRG6Q86SQ4 1221 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 PYROXD2Q8N2H3 581 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 SHCBP1Q8NEM2 672 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 C18orf25Q96B23 403 aaPredicted RBP8.31□□□□□ -1.08
GDNF-208ENST00000620847 DGCR14Q96DF8 476 aaKnown RBP8.31□□□□□ -1.08
GDNF-208ENST00000620847 RCOR3Q9P2K3 495 aaPredicted RBP8.31□□□□□ -1.08
GDNF-208ENST00000620847 SLC17A6Q9P2U8 582 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 GJD2Q9UKL4 321 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 TSC2P49815 1807 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 ARHGAP42A6NI28 874 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 PRR5-ARHGAP8B1AHC4 643 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 COQ9O75208 318 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 GLRA3O75311 464 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 CCDC166P0CW27 439 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 LCP1P13796 627 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 UQCRBP14927 111 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 AOC1P19801 751 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 TPP2P29144 1249 aaPredicted RBP8.31□□□□□ -1.08
GDNF-208ENST00000620847 ARHGAP8P85298 464 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 PPIL2Q13356 520 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 PDE1CQ14123 709 aaPredicted RBP8.31□□□□□ -1.08
GDNF-208ENST00000620847 TEDDM1Q5T9Z0 273 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 KLC3Q6P597 504 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 ALKAL1Q6UXT8 129 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 ANKRD13AQ8IZ07 590 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 CRYBG2Q8N1P7 616 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 C7orf31Q8N865 590 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 COLGALT1Q8NBJ5 622 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 PIWIL2Q8TC59 973 aaKnown RBP8.31□□□□□ -1.08
GDNF-208ENST00000620847 KBTBD7Q8WVZ9 684 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 DCPSQ96C86 337 aaKnown RBP8.31□□□□□ -1.08
GDNF-208ENST00000620847 LGMNQ99538 433 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 SUDS3Q9H7L9 328 aaPredicted RBP8.31□□□□□ -1.08
GDNF-208ENST00000620847 XPNPEP3Q9NQH7 507 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 ZDHHC7Q9NXF8 308 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.31□□□□□ -1.08
GDNF-208ENST00000620847 CLIC5Q9NZA1 410 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 SLC7A8Q9UHI5 535 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 PPM1HQ9ULR3 514 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 FZD10Q9ULW2 581 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 TBC1D30Q9Y2I9 924 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 SBF1O95248 1867 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 H3BRB1 525 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 TXNDC9O14530 226 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 TPP1O14773 563 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 HNRNPRO43390 633 aaKnown RBP8.31□□□□□ -1.08
GDNF-208ENST00000620847 ITM2AO43736 263 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 ATP9BO43861 1147 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 USP1O94782 785 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 PRKCGP05129 697 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 PGAM1P18669 254 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 ADORA2BP29275 332 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 CPOXP36551 454 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 CRADDP78560 199 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 XIAPP98170 497 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 NAB1Q13506 487 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 UBAP2LQ14157 1087 aaKnown RBP8.31□□□□□ -1.08
GDNF-208ENST00000620847 GRIK4Q16099 956 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 ZNF792Q3KQV3 632 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 MMEL1Q495T6 779 aa8.31□□□□□ -1.08
GDNF-208ENST00000620847 N4BP2L1Q5TBK1 243 aaPredicted RBP8.31□□□□□ -1.08
GDNF-208ENST00000620847 C9orf57Q5W0N0 161 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms