RNA–Protein interactions for RNA: ENST00000620040.4

DMD-230, Transcript of dystrophin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DMD, Length 13,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-230ENST00000620040 NIPAL1Q6NVV3 410 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 UTS2BQ765I0 119 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 IQCKQ8N0W5 287 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 MCEEQ96PE7 176 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 RIBC2Q9H4K1 309 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 REEP1Q9H902 201 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 SALL1Q9NSC2 1324 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 RPLP2P05387 115 aaKnown RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 CNPP09543 421 aaKnown RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 ETS1P14921 441 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 TSHRP16473 764 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 PPP3CCP48454 512 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 NCCRP1Q6ZVX7 275 aaPredicted RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 FAM220AQ7Z4H9 259 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 EMC1Q8N766 993 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 OR6B3Q8NGW1 331 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 VCPIP1Q96JH7 1222 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 COPS7BQ9H9Q2 264 aaPredicted RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 DNAAF2Q9NVR5 837 aaKnown RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 UPB1Q9UBR1 384 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 PCDHGC5Q9Y5F6 944 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 RGPD1P0DJD0 1748 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 TJP1Q07157 1748 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 ZBTB5O15062 677 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 PDE8BO95263 885 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 BMP10O95393 424 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 SERPINA6P08185 405 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 IDO1P14902 403 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 MSR1P21757 451 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 EFNA5P52803 228 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 PEX3P56589 373 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 FASTKQ14296 549 aaKnown RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 GALNT3Q14435 633 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 PTGES3Q15185 160 aaKnown RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 OR8H3Q8N146 312 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 SLC25A41Q8N5S1 370 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 SLC30A5Q8TAD4 765 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 KCTD4Q8WVF5 259 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 KIAA1683Q9H0B3 1180 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 AASSQ9UDR5 926 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 SPACA6W5XKT8 324 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 CARNS1A5YM72 827 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 C5orf60A6NFR6 353 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 FOXO3O43524 673 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 UGT2B11O75310 529 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 VPS26AO75436 327 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 KHDRBS3O75525 346 aaKnown RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 ABHD2P08910 425 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 TPBGLP0DKB5 382 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 BGNP21810 368 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 DNAJB2P25686 324 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 PTPN7P35236 360 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 PIK3CGP48736 1102 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 CCNG1P51959 295 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 MRPS22P82650 360 aaKnown RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 TCIRG1Q13488 830 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 SUZ12Q15022 739 aaKnown RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 CLEC16AQ2KHT3 1053 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 BHLHB9Q6PI77 547 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 DDX17Q92841 729 aaKnown RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 CHORDC1Q9UHD1 332 aaPredicted RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 NAALADL1Q9UQQ1 740 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 AAR2Q9Y312 384 aaKnown RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 WNK3Q9BYP7 1800 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 LRRC37A3O60309 1634 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 TOP3BO95985 862 aaKnown RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 FAM153BP0C7A2 387 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 NR4A1P22736 598 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 TRIM28Q13263 835 aaKnown RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 IDI1Q13907 227 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 PLCL1Q15111 1095 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 TXNRD1Q16881 649 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 FUT11Q495W5 492 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 GALNTL6Q49A17 601 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 AGKQ53H12 422 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 GPR107Q5VW38 600 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 SRBD1Q8N5C6 995 aaKnown RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 TRPV3Q8NET8 790 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 CKAP2Q8WWK9 683 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 CPNE1Q99829 537 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 TSEN34Q9BSV6 310 aaKnown RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 TDRD1Q9BXT4 1180 aaKnown RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 CATSPERBQ9H7T0 1116 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 NOL11Q9H8H0 719 aaKnown RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 AP4B1Q9Y6B7 739 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 ARFGEF2Q9Y6D5 1785 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 PTGES3LE9PB15 166 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 KCNQ3O43525 872 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 BMP3P12645 472 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 CRABP2P29373 138 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 ZBTB6Q15916 424 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 ZYXQ15942 572 aaKnown RBP4.28□□□□□ -1.72
DMD-230ENST00000620040 GRTP1Q5TC63 336 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 CRTC3Q6UUV7 619 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 DNAAF5Q86Y56 855 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 FAR1Q8WVX9 515 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 TCF12Q99081 682 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 PCDH9Q9HC56 1237 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 BARHL2Q9NY43 387 aa4.28□□□□□ -1.72
DMD-230ENST00000620040 PPP2R3BQ9Y5P8 575 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms