RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 WFIKKN2Q8TEU8 576 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 SORCS1Q8WY21 1168 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 NAP1L5Q96NT1 182 aaPredicted RBP16.55■□□□□ 0.24
BRCA1-228ENST00000618469 PCDHB18PQ96TA0 734 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 GABRG3Q99928 467 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 ADAM33Q9BZ11 813 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 RRN3Q9NYV6 651 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 CALCOCO1Q9P1Z2 691 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 SLC12A6Q9UHW9 1150 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 ABCA7Q8IZY2 2146 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 ZZEF1O43149 2961 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 NUP205Q92621 2012 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 ASPMQ8IZT6 3477 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 A0A1W2PQC6 194 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 A0A1W2PQF6 199 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 LRRC53A6NM62 1247 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 KCNU1A8MYU2 1149 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 WASH3PC4AMC7 463 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 MMP8P22894 467 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 GGCXP38435 758 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 IL12RB1P42701 662 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 FANCCQ00597 558 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 CREB5Q02930 508 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 CENPCQ03188 943 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 ZNF252P-AS1Q0IIN9 211 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 STARD3Q14849 445 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 CLEC16AQ2KHT3 1053 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 TMEM215Q68D42 235 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 KIAA1211LQ6NV74 962 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 CHST9Q7L1S5 443 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 PHLDB2Q86SQ0 1253 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 CCDC117Q8IWD4 279 aaPredicted RBP16.54■□□□□ 0.24
BRCA1-228ENST00000618469 CFAP52Q8N1V2 620 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 CARNMT1Q8N4J0 409 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.54■□□□□ 0.24
BRCA1-228ENST00000618469 ZNF557Q8N988 423 aaPredicted RBP16.54■□□□□ 0.24
BRCA1-228ENST00000618469 BAP1Q92560 729 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 TBCBQ99426 244 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 NPY6RQ99463 290 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 EDEM2Q9BV94 578 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 PIGVQ9NUD9 493 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 ELOVL2Q9NXB9 296 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 THAP10Q9P2Z0 257 aaPredicted RBP16.54■□□□□ 0.24
BRCA1-228ENST00000618469 STON1Q9Y6Q2 735 aa16.54■□□□□ 0.24
BRCA1-228ENST00000618469 PLXND1Q9Y4D7 1925 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 IGF2RP11717 2491 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 LUC7L3O95232 432 aaKnown RBP16.53■□□□□ 0.24
BRCA1-228ENST00000618469 CCDC172P0C7W6 258 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 UNGP13051 313 aaPredicted RBP16.53■□□□□ 0.24
BRCA1-228ENST00000618469 GABRG2P18507 467 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 CD70P32970 193 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 DEUP1Q05D60 604 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 LMAN2Q12907 356 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 ZNF234Q14588 700 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 USP39Q53GS9 565 aaKnown RBP16.53■□□□□ 0.24
BRCA1-228ENST00000618469 SH3PXD2AQ5TCZ1 1133 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 TRNP1Q6NT89 227 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 SERPINA13PQ6UXR4 307 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 CIR1Q86X95 450 aaPredicted RBP16.53■□□□□ 0.24
BRCA1-228ENST00000618469 EMC1Q8N766 993 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 CYB5D2Q8WUJ1 264 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 LOXL4Q96JB6 756 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 CFAP57Q96MR6 1250 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 AGPAT1Q99943 283 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 MYO6Q9UM54 1294 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 CKAP5Q14008 2032 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 ZFYVE26Q68DK2 2539 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 THADAQ6YHU6 1953 aa16.53■□□□□ 0.24
BRCA1-228ENST00000618469 NPC1O15118 1278 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 ZBTB24O43167 697 aaPredicted RBP16.52■□□□□ 0.24
BRCA1-228ENST00000618469 NDUFV2P19404 249 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 PRKCHP24723 683 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 E2F5Q15329 346 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 ELF2Q15723 593 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 ASIC2Q16515 512 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 SLC25A52Q3SY17 297 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 FUT11Q495W5 492 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 PLK5Q496M5 336 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 FNDC3BQ53EP0 1204 aaKnown RBP16.52■□□□□ 0.24
BRCA1-228ENST00000618469 RABGAP1LQ5R372 815 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 MBLAC2Q68D91 279 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 SND1Q7KZF4 910 aaKnown RBP eCLIP16.52■□□□□ 0.24
BRCA1-228ENST00000618469 ADIPOR2Q86V24 386 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 RLN3Q8WXF3 142 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 NT5C3BQ969T7 300 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 SPACA7Q96KW9 195 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 RPRD1AQ96P16 312 aaPredicted RBP16.52■□□□□ 0.24
BRCA1-228ENST00000618469 PRMT1Q99873 361 aaKnown RBP16.52■□□□□ 0.24
BRCA1-228ENST00000618469 DUSP15Q9H1R2 295 aaPredicted RBP16.52■□□□□ 0.24
BRCA1-228ENST00000618469 ADAM22Q9P0K1 906 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 TMEM59LQ9UK28 342 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 HS3ST4Q9Y661 456 aa16.52■□□□□ 0.24
BRCA1-228ENST00000618469 H0Y626 953 aa16.51■□□□□ 0.23
BRCA1-228ENST00000618469 PAGE1O75459 146 aa16.51■□□□□ 0.23
BRCA1-228ENST00000618469 GJB6O95452 261 aa16.51■□□□□ 0.23
BRCA1-228ENST00000618469 ADCY5O95622 1261 aa16.51■□□□□ 0.23
BRCA1-228ENST00000618469 CALB1P05937 261 aa16.51■□□□□ 0.23
BRCA1-228ENST00000618469 BCKDHBP21953 392 aa16.51■□□□□ 0.23
BRCA1-228ENST00000618469 RDXP35241 583 aaKnown RBP16.51■□□□□ 0.23
BRCA1-228ENST00000618469 CXCR3P49682 368 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms