RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 MAP3K6O95382 1288 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 OPRL1P41146 370 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 AP3M2P53677 418 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 DLG4P78352 724 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 DLGAP5Q15398 846 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 STK11Q15831 433 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 PTPN20Q4JDL3 420 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 ATAD3BQ5T9A4 648 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 LGSNQ5TDP6 509 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 RCN3Q96D15 328 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 TBATAQ96M53 351 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 SLC29A1Q99808 456 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 C1orf50Q9BV19 199 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 NEK6Q9HC98 313 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 NARFQ9UHQ1 456 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 PMF1-BGLAPU3KQ54 211 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 C5P01031 1676 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 CNTNAP2Q9UHC6 1331 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 WDR64B1ANS9 1081 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 PDXKO00764 312 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 SGTAO43765 313 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 HSPA4LO95757 839 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 WEE1P30291 646 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 NT5C2P49902 561 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 PRKAA2P54646 552 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 SELENBP1Q13228 472 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 RAB39AQ14964 217 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 FAM47CQ5HY64 1035 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 SIGIRRQ6IA17 410 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 BORAQ6PGQ7 559 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 DACH2Q96NX9 599 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 TMEM47Q9BQJ4 181 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 KIAA1257Q9ULG3 409 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 UGT2A1Q9Y4X1 527 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 TRIM64A6NGJ6 449 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 TRIM64BA6NI03 449 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 SYCE1LA8MT33 242 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 TISP43B9A030 160 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 CCNKO75909 580 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 SAT1P21673 171 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 HIBADHP31937 336 aaKnown RBP12.55□□□□□ -0.4
MATR3-227ENST00000618441 HPCAL1P37235 193 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 TAS2R40P59535 323 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 CTBSQ01459 385 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 TBCCQ15814 346 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 HSF5Q4G112 596 aaPredicted RBP12.55□□□□□ -0.4
MATR3-227ENST00000618441 ANKRD26P1Q6NSI1 321 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 LRRC8EQ6NSJ5 796 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 OSTM1Q86WC4 334 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 FIBCD1Q8N539 461 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 POC5Q8NA72 575 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 KBTBD7Q8WVZ9 684 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 ING2Q9H160 280 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 DCAF16Q9NXF7 216 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 MAD2L2Q9UI95 211 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 IFT52Q9Y366 437 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 CLUHO75153 1309 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 ALOX15BO15296 676 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 NADKO95544 446 aaPredicted RBP12.54□□□□□ -0.4
MATR3-227ENST00000618441 GH2P01242 217 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 CDH1P12830 882 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 PRKACAP17612 351 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 ATF4P18848 351 aaPredicted RBP12.54□□□□□ -0.4
MATR3-227ENST00000618441 POLR2EP19388 210 aaKnown RBP12.54□□□□□ -0.4
MATR3-227ENST00000618441 NSFP46459 744 aaKnown RBP12.54□□□□□ -0.4
MATR3-227ENST00000618441 ECT2LQ008S8 904 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 EFHC2Q5JST6 749 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 FAM178BQ8IXR5 827 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 LRRC47Q8N1G4 583 aaKnown RBP12.54□□□□□ -0.4
MATR3-227ENST00000618441 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.54□□□□□ -0.4
MATR3-227ENST00000618441 PIWIL2Q8TC59 973 aaKnown RBP12.54□□□□□ -0.4
MATR3-227ENST00000618441 TMC2Q8TDI7 906 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 ZNF486Q96H40 463 aaPredicted RBP12.54□□□□□ -0.4
MATR3-227ENST00000618441 CDK5RAP1Q96SZ6 601 aaKnown RBP12.54□□□□□ -0.4
MATR3-227ENST00000618441 RIOK1Q9BRS2 568 aaKnown RBP12.54□□□□□ -0.4
MATR3-227ENST00000618441 PKD2L2Q9NZM6 624 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 SNX9Q9Y5X1 595 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 SQORQ9Y6N5 450 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 USP17L15C9J2P7 530 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 USP17L13C9JLJ4 530 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 USP17L11C9JVI0 530 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 USP17L18D6R9N7 530 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 USP17L22D6RA61 530 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 USP17L17D6RBQ6 530 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 USP17L19D6RCP7 530 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 USP17L20D6RJB6 530 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 MS4A2Q01362 244 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 USP17L24Q0WX57 530 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 SMTNL2Q2TAL5 461 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 ZNF568Q3ZCX4 644 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 FRA10AC1Q70Z53 315 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 DEFB132Q7Z7B7 95 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 ELMOD1Q8N336 334 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 GALNT6Q8NCL4 622 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 NT5C1BQ96P26 610 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 ZNF717Q9BY31 904 aaPredicted RBP12.54□□□□□ -0.4
MATR3-227ENST00000618441 RAD21L1Q9H4I0 556 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 WDR55Q9H6Y2 383 aaPredicted RBP12.54□□□□□ -0.4
MATR3-227ENST00000618441 CCSER2Q9H7U1 834 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 COL18A1P39060 1754 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms