RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 BBS12Q6ZW61 710 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 YTHDF3Q7Z739 585 aaKnown RBP16.78■□□□□ 0.28
SNAP47-213ENST00000617596 EFHBQ8N7U6 833 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 ST13P5Q8NFI4 369 aaPredicted RBP16.78■□□□□ 0.28
SNAP47-213ENST00000617596 FAF2Q96CS3 445 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 BTN2A3PQ96KV6 586 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 RHOXF2Q9BQY4 288 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 OSBPL2Q9H1P3 480 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 MPP6Q9NZW5 540 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 MRPS23Q9Y3D9 190 aaKnown RBP16.78■□□□□ 0.28
SNAP47-213ENST00000617596 HEY1Q9Y5J3 304 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 MTCH2Q9Y6C9 303 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 TRAV19A0A0A6YYK7 116 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 H3BRJ5 948 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 OBSL1O75147 1896 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 EPHB2P29323 1055 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 HARS2P49590 506 aaKnown RBP16.78■□□□□ 0.28
SNAP47-213ENST00000617596 KPNA1P52294 538 aaPredicted RBP16.78■□□□□ 0.28
SNAP47-213ENST00000617596 MLLT6P55198 1093 aaPredicted RBP16.78■□□□□ 0.28
SNAP47-213ENST00000617596 RFWD3Q6PCD5 774 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 SYCE2Q6PIF2 218 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 ATP6V0D2Q8N8Y2 350 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 MAGOHBQ96A72 148 aaKnown RBP16.78■□□□□ 0.28
SNAP47-213ENST00000617596 NOTCH4Q99466 2003 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 AMACRQ9UHK6 382 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 NEU3Q9UQ49 428 aa16.78■□□□□ 0.28
SNAP47-213ENST00000617596 SRRM3A6NNA2 597 aaPredicted RBP16.77■□□□□ 0.28
SNAP47-213ENST00000617596 GOLGA8KD6RF30 607 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 E9PAM4 449 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 APOL1O14791 398 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 FSBPO95073 299 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 ERCC2P18074 760 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 SLC6A4P31645 630 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 OTUD4Q01804 1114 aaKnown RBP16.77■□□□□ 0.28
SNAP47-213ENST00000617596 GBE1Q04446 702 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 AUHQ13825 339 aaKnown RBP16.77■□□□□ 0.28
SNAP47-213ENST00000617596 DPYSQ14117 519 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 NUGGCQ68CJ6 796 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 NCBP2-AS2Q69YL0 99 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 SLC9A4Q6AI14 798 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 TP53INP2Q8IXH6 220 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 CMTM8Q8IZV2 173 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 ACTL9Q8TC94 416 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 EPAS1Q99814 870 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 LRRC1Q9BTT6 524 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 DCLK3Q9C098 648 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 SLC12A6Q9UHW9 1150 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 GGA2Q9UJY4 613 aa16.77■□□□□ 0.28
SNAP47-213ENST00000617596 AGO1Q9UL18 857 aaKnown RBP16.77■□□□□ 0.28
SNAP47-213ENST00000617596 GOLGA6L10A0A0M3HER8 536 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 EIF3HO15372 352 aaKnown RBP eCLIP16.76■□□□□ 0.27
SNAP47-213ENST00000617596 SKOR1P84550 965 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 SLC7A5Q01650 507 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 SLC10A2Q12908 348 aaPredicted RBP16.76■□□□□ 0.27
SNAP47-213ENST00000617596 ANKRD54Q6NXT1 300 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 FBXL22Q6P050 247 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 CIR1Q86X95 450 aaPredicted RBP16.76■□□□□ 0.27
SNAP47-213ENST00000617596 UNC45BQ8IWX7 931 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 RIN3Q8TB24 985 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 IGSF8Q969P0 613 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 PLD4Q96BZ4 506 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 CLEC1BQ9P126 229 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 DNPEPQ9ULA0 475 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 EFR3BQ9Y2G0 817 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 ACSL4O60488 711 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 PHF2O75151 1096 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 TBX10O75333 385 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 AVPR1AP37288 418 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 SLC7A9P82251 487 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 ITIH3Q06033 890 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 ADAM15Q13444 863 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 TFDP2Q14188 446 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 CLUL1Q15846 466 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 ARHGAP15Q53QZ3 475 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 FAM133BQ5BKY9 247 aaKnown RBP16.76■□□□□ 0.27
SNAP47-213ENST00000617596 MANEALQ5VSG8 457 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 TMEM184AQ6ZMB5 413 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 ZC3H18Q86VM9 953 aaKnown RBP16.76■□□□□ 0.27
SNAP47-213ENST00000617596 CHSY1Q86X52 802 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 CFAP52Q8N1V2 620 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 LEMD2Q8NC56 503 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 PRMT1Q99873 361 aaKnown RBP16.76■□□□□ 0.27
SNAP47-213ENST00000617596 SH3GL2Q99962 352 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 TASP1Q9H6P5 420 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 NDFIP2Q9NV92 336 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 DZANK1Q9NVP4 752 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 CLDND1Q9NY35 253 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 CFAP97Q9P2B7 532 aa16.76■□□□□ 0.27
SNAP47-213ENST00000617596 CCDC188H7C350 402 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 APOC4-APOC2K7ER74 178 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 DCLK1O15075 740 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 RAD51CO43502 376 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 GREM1O60565 184 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 CNTN5O94779 1100 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 PRAMEF12O95522 483 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 APOC2P02655 101 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 NUMBP49757 651 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 VCPP55072 806 aaKnown RBP16.75■□□□□ 0.27
SNAP47-213ENST00000617596 CCDC137Q6PK04 289 aaKnown RBP16.75■□□□□ 0.27
SNAP47-213ENST00000617596 TFAP2DQ7Z6R9 452 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms