RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 CDYLQ9Y232 598 aa14.34□□□□□ -0.11
TNFRSF11A-205ENST00000616710 GINS2Q9Y248 185 aa14.34□□□□□ -0.11
TNFRSF11A-205ENST00000616710 DUOX1Q9NRD9 1551 aa14.33□□□□□ -0.11
TNFRSF11A-205ENST00000616710 GLRA3O75311 464 aa14.33□□□□□ -0.11
TNFRSF11A-205ENST00000616710 ITGAVP06756 1048 aa14.33□□□□□ -0.11
TNFRSF11A-205ENST00000616710 AOC1P19801 751 aa14.33□□□□□ -0.11
TNFRSF11A-205ENST00000616710 SLC18A1P54219 525 aa14.33□□□□□ -0.11
TNFRSF11A-205ENST00000616710 NOMO3P69849 1222 aa14.33□□□□□ -0.11
TNFRSF11A-205ENST00000616710 ITPK1Q13572 414 aa14.33□□□□□ -0.11
TNFRSF11A-205ENST00000616710 HNRNPDQ14103 355 aaKnown RBP14.33□□□□□ -0.11
TNFRSF11A-205ENST00000616710 PAGE2BQ5JRK9 111 aa14.33□□□□□ -0.11
TNFRSF11A-205ENST00000616710 RSPH1Q8WYR4 309 aa14.33□□□□□ -0.11
TNFRSF11A-205ENST00000616710 COQ7Q99807 217 aa14.33□□□□□ -0.11
TNFRSF11A-205ENST00000616710 POU2F3Q9UKI9 436 aa14.33□□□□□ -0.11
TNFRSF11A-205ENST00000616710 TMED5Q9Y3A6 229 aa14.33□□□□□ -0.11
TNFRSF11A-205ENST00000616710 MRPL42Q9Y6G3 142 aaKnown RBP14.33□□□□□ -0.11
TNFRSF11A-205ENST00000616710 GAKO14976 1311 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 KPNA7A9QM74 516 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 TBX3O15119 743 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 PDGFRAP16234 1089 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 CPOXP36551 454 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 CDKN2BP42772 138 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 NPTX2P47972 431 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 BMXP51813 675 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 DLGAP5Q15398 846 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 ZNF423Q2M1K9 1284 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 UNC5AQ6ZN44 842 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 TMEM143Q96AN5 459 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 CEP295NLQ96MC4 621 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 CITED4Q96RK1 184 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 SLC29A1Q99808 456 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 AVENQ9NQS1 362 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 TUBA8Q9NY65 449 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 ZNRF3Q9ULT6 936 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 SPEF2Q9C093 1822 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 LTN1O94822 1766 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 KCNU1A8MYU2 1149 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 PHGDHO43175 533 aaKnown RBP14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 MTA2O94776 668 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 POLD3Q15054 466 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 IMPG1Q17R60 797 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 ZFP1Q6P2D0 407 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 LILRA2Q8N149 483 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 NSMCE3Q96MG7 304 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 RNF38Q9H0F5 515 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 PLEKHA5Q9HAU0 1116 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 FBXO28Q9NVF7 368 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 AGO2Q9UKV8 859 aaKnown RBP14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 PRELID1Q9Y255 219 aa14.33□□□□□ -0.12
TNFRSF11A-205ENST00000616710 AKAP11Q9UKA4 1901 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 PLOD2O00469 737 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 GARTP22102 1010 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 SREBF1P36956 1147 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 STX1BP61266 288 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 KCTD8Q6ZWB6 473 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 KBTBD6Q86V97 674 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 C7orf31Q8N865 590 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 NAT8LQ8N9F0 302 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 CALML6Q8TD86 181 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 LPGAT1Q92604 370 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 ZNF669Q96BR6 464 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 FBXL20Q96IG2 436 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 DMAC2Q9NW81 257 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 DNAJC28Q9NX36 388 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 CCNL1Q9UK58 526 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 VAV3Q9UKW4 847 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 SCAF8Q9UPN6 1271 aaKnown RBP14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 RGSL1A5PLK6 1076 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 INPP4BO15327 924 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 NCAM1P13591 858 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 IL10P22301 178 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 GRK2P25098 689 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 ADSLP30566 484 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 RAP1GAPP47736 663 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 OGDHQ02218 1023 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 C15orf59Q2T9L4 293 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 OGFRL1Q5TC84 451 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 AFAP1L2Q8N4X5 818 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 SDCCAG3Q96C92 435 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 RPL10LQ96L21 214 aaKnown RBP14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 TRIM8Q9BZR9 551 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 ROBO3Q96MS0 1386 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 NOTOA8MTQ0 251 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 K7ERI5 159 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 UNGP13051 313 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 ZNF829Q3KNS6 432 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 CCDC153Q494R4 210 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 TEDDM1Q5T9Z0 273 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 HEATR6Q6AI08 1181 aaKnown RBP14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 DAW1Q8N136 415 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 HEXIM2Q96MH2 286 aaKnown RBP14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 SH3GL1Q99961 368 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 TARS2Q9BW92 718 aaKnown RBP14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 PAK5Q9P286 719 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 PNMA8BQ9ULN7 279 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 MYPNQ86TC9 1320 aa14.32□□□□□ -0.12
TNFRSF11A-205ENST00000616710 KDELR1P24390 212 aa14.31□□□□□ -0.12
TNFRSF11A-205ENST00000616710 MIPP30301 263 aa14.31□□□□□ -0.12
TNFRSF11A-205ENST00000616710 RARRES1P49788 294 aa14.31□□□□□ -0.12
TNFRSF11A-205ENST00000616710 YWHAZP63104 245 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms