RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 MRM3Q9HC36 420 aaKnown RBP12.89□□□□□ -0.35
TCF4-248ENST00000616053 PSMD13Q9UNM6 376 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 EFR3BQ9Y2G0 817 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 KIAA0586Q9BVV6 1533 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 C9J4A7 227 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 CYP2D6P10635 497 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 SAMD7Q7Z3H4 446 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 OVCA2Q8WZ82 227 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 COLEC10Q9Y6Z7 277 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 XKRYO14609 159 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 SQLEQ14534 574 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 MFSD7Q6UXD7 560 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 TRABDQ9H4I3 376 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 PXMP2Q9NR77 195 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 ZNF879B4DU55 563 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 MICAL2O94851 1124 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 F9P00740 461 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 APOC1P02654 83 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 ACAT1P24752 427 aaKnown RBP12.89□□□□□ -0.35
TCF4-248ENST00000616053 HNF4AP41235 474 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 MRPS25P82663 173 aaKnown RBP12.89□□□□□ -0.35
TCF4-248ENST00000616053 NDUFA9Q16795 377 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 ARL6IP4Q66PJ3 421 aaKnown RBP12.89□□□□□ -0.35
TCF4-248ENST00000616053 HOMEZQ8IX15 550 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 SLC4A5Q9BY07 1137 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 RSAD1Q9HA92 442 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 CYP4F12Q9HCS2 524 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 NARFQ9UHQ1 456 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 DNAJC16Q9Y2G8 782 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 DNALI1O14645 258 aaPredicted RBP12.89□□□□□ -0.35
TCF4-248ENST00000616053 RGL2O15211 777 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 RGS14O43566 566 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 MAFKO60675 156 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 ADH1AP07327 375 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 SERPINA4P29622 427 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 STARP49675 285 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 SCRN1Q12765 414 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 SP8Q8IXZ3 490 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 CENPIQ92674 756 aaPredicted RBP12.89□□□□□ -0.35
TCF4-248ENST00000616053 TMEM47Q9BQJ4 181 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 CPVLQ9H3G5 476 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 CCDC162PA2VCL2 907 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 RTN2O75298 545 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 RXRGP48443 463 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 RAB27AP51159 221 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 ATG14Q6ZNE5 492 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 ILDR2Q71H61 639 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 DET1Q7L5Y6 550 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 ENKURQ8TC29 256 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 YIPF3Q9GZM5 350 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 CKLFQ9UBR5 152 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 TMEM94Q12767 1356 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 RPAP1Q9BWH6 1393 aaPredicted RBP12.89□□□□□ -0.35
TCF4-248ENST00000616053 SERPINA3P01011 423 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 CDK13Q14004 1512 aaKnown RBP12.89□□□□□ -0.35
TCF4-248ENST00000616053 FAM135BQ49AJ0 1406 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 GRID1Q9ULK0 1009 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 ANGPT4Q9Y264 503 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 H0Y858 1186 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 IFNA6P05013 189 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 RPS12P25398 132 aaKnown RBP12.88□□□□□ -0.35
TCF4-248ENST00000616053 CACNA2D1P54289 1103 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 EPS8Q12929 822 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 PTK7Q13308 1070 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 DCTN2Q13561 401 aaKnown RBP12.88□□□□□ -0.35
TCF4-248ENST00000616053 SLC39A14Q15043 492 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 PTPN21Q16825 1174 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 OVOS1Q6IE37 1185 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 SOCS4Q8WXH5 440 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 MAML3Q96JK9 1138 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 IRX2Q9BZI1 471 aaPredicted RBP12.88□□□□□ -0.35
TCF4-248ENST00000616053 ADPRHL2Q9NX46 363 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 PHF2O75151 1096 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 SERPINF2P08697 491 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 CYP2C8P10632 490 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 LONRF1Q17RB8 773 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 SUSD4Q5VX71 490 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 TMEM26Q6ZUK4 368 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 MTDHQ86UE4 582 aaKnown RBP12.88□□□□□ -0.35
TCF4-248ENST00000616053 ZNF786Q8N393 782 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 ENY2Q9NPA8 101 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 COPS7AQ9UBW8 275 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 MROH7-TTC4A0A0A0MT08 1334 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 EPORP19235 508 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 FAM91A1Q658Y4 838 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 C7orf61Q8IZ16 206 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 UBE2E3Q969T4 207 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 GPRC5DQ9NZD1 345 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 CLEC4AQ9UMR7 237 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 A6NCN8 305 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 NR5A2O00482 541 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 GATBO75879 557 aaKnown RBP12.88□□□□□ -0.35
TCF4-248ENST00000616053 BMP7P18075 431 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 TFE3P19532 575 aaPredicted RBP12.88□□□□□ -0.35
TCF4-248ENST00000616053 TBX4P57082 545 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 TOB2Q14106 344 aaPredicted RBP12.88□□□□□ -0.35
TCF4-248ENST00000616053 LRP8Q14114 963 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 RAD51AP1Q96B01 352 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 PAGE5Q96GU1 130 aa12.88□□□□□ -0.35
TCF4-248ENST00000616053 ZSWIM5Q9P217 1185 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms