RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 SLC10A2Q12908 348 aaPredicted RBP13.49□□□□□ -0.25
MSH6-214ENST00000616033 ITGA7Q13683 1181 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 NOMO1Q15155 1222 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 TBCCQ15814 346 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 PITRM1Q5JRX3 1037 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 BNC2Q6ZN30 1099 aaPredicted RBP13.49□□□□□ -0.25
MSH6-214ENST00000616033 KBTBD6Q86V97 674 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 PLD5Q8N7P1 536 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 C12orf29Q8N999 325 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 TDRD5Q8NAT2 981 aaKnown RBP13.49□□□□□ -0.25
MSH6-214ENST00000616033 IDI2Q9BXS1 227 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 SENP6Q9GZR1 1112 aaPredicted RBP13.49□□□□□ -0.25
MSH6-214ENST00000616033 FETUBQ9UGM5 382 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 ATP9BO43861 1147 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 CLIC3O95833 236 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 ICAM1P05362 532 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 CKMT2P17540 419 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 VARSP26640 1264 aaKnown RBP13.49□□□□□ -0.25
MSH6-214ENST00000616033 YWHAEP62258 255 aaKnown RBP13.49□□□□□ -0.25
MSH6-214ENST00000616033 MTX3Q5HYI7 312 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 NAPRTQ6XQN6 538 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 SCUBE3Q8IX30 993 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 PQLC3Q8N755 202 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 C7orf31Q8N865 590 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 GABPB2Q8TAK5 448 aaPredicted RBP13.49□□□□□ -0.25
MSH6-214ENST00000616033 CLEC4DQ8WXI8 215 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 NLRP4Q96MN2 994 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 C1orf21Q9H246 121 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 NDUFA13Q9P0J0 144 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 DNAJB4Q9UDY4 337 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 DMTF1Q9Y222 760 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 PPME1Q9Y570 386 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 INO80B-WBP1J3KQ70 363 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 LTFP02788 710 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 ACTR2P61160 394 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 SNRPFP62306 86 aaKnown RBP13.49□□□□□ -0.25
MSH6-214ENST00000616033 TFDP2Q14188 446 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 DACT2Q5SW24 774 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 IL23RQ5VWK5 629 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 FASTKD5Q7L8L6 764 aaKnown RBP13.49□□□□□ -0.25
MSH6-214ENST00000616033 PODNQ7Z5L7 613 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 ZNF786Q8N393 782 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 TTC16Q8NEE8 873 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 LRTOMTQ8WZ04 291 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 LGMNQ99538 433 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 EBNA1BP2Q99848 306 aaKnown RBP13.49□□□□□ -0.25
MSH6-214ENST00000616033 INO80BQ9C086 356 aaPredicted RBP13.49□□□□□ -0.25
MSH6-214ENST00000616033 ASNSD1Q9NWL6 643 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 ITGA11Q9UKX5 1188 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 SAC3D1A6NKF1 404 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 ASS1P00966 412 aaKnown RBP13.48□□□□□ -0.25
MSH6-214ENST00000616033 PIK3R1P27986 724 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 GRM2Q14416 872 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 DUOXA2Q1HG44 320 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 FSCBQ5H9T9 825 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 XYLT1Q86Y38 959 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 KYQ8NBH2 561 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 CDKL2Q92772 493 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 SORT1Q99523 831 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 B3GNT5Q9BYG0 378 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 COQ10BQ9H8M1 238 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 JPH1Q9HDC5 661 aaPredicted RBP13.48□□□□□ -0.25
MSH6-214ENST00000616033 EPS15L1Q9UBC2 864 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 SPDYE2BA6NHP3 402 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 YDJCA8MPS7 323 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 SPAG6O75602 509 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 PSAPP07602 524 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 SPDYE6P0CI01 402 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 COL6A2P12110 1019 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 SLC5A3P53794 718 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 NME5P56597 212 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 XKR5Q6UX68 686 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 MCF2L2Q86YR7 1114 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 RNF157Q96PX1 679 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 SERPINI1Q99574 410 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 MRPS26Q9BYN8 205 aaKnown RBP13.48□□□□□ -0.25
MSH6-214ENST00000616033 ZDHHC7Q9NXF8 308 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 ARHGAP28Q9P2N2 729 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 RSL24D1Q9UHA3 163 aaKnown RBP13.48□□□□□ -0.25
MSH6-214ENST00000616033 FEM1BQ9UK73 627 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 TMEM233B4DJY2 109 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 CHADO15335 359 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 RNASEH2AO75792 299 aaKnown RBP13.48□□□□□ -0.25
MSH6-214ENST00000616033 DPEP1P16444 411 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 GABRB2P47870 512 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 SH3BGRP55822 239 aaPredicted RBP13.48□□□□□ -0.25
MSH6-214ENST00000616033 CEACAM7Q14002 265 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 PGM2L1Q6PCE3 622 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 KCNT2Q6UVM3 1135 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 PACS1Q6VY07 963 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 CHST15Q7LFX5 561 aaPredicted RBP13.48□□□□□ -0.25
MSH6-214ENST00000616033 ZNF410Q86VK4 478 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 TMEM192Q8IY95 271 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 DNAAF3Q8N9W5 541 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 COPG2Q9UBF2 871 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 EBF1Q9UH73 591 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 AURKCQ9UQB9 309 aa13.48□□□□□ -0.25
MSH6-214ENST00000616033 KLRG2A4D1S0 409 aaPredicted RBP13.47□□□□□ -0.25
MSH6-214ENST00000616033 FAM149AA5PLN7 773 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms