RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 CLCA2Q9UQC9 943 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 GDAQ9Y2T3 454 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 KIAA0100Q14667 2235 aaKnown RBP9.46□□□□□ -0.9
COL12A1-211ENST00000615798 PRAMEF22A3QJZ6 481 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 GMFGO60234 142 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 PSAPP07602 524 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 CDH11P55287 796 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 NAA20P61599 178 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 TOMM20Q15388 145 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 LCN1P1Q5VSP4 162 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 SYCE2Q6PIF2 218 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 TRIM65Q6PJ69 517 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 GRAMD1CQ8IYS0 662 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 OR6Y1Q8NGX8 325 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 PSD2Q9BQI7 771 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 TDRD1Q9BXT4 1180 aaKnown RBP9.46□□□□□ -0.9
COL12A1-211ENST00000615798 MAGEE1Q9HCI5 957 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 OR2AT4A6NND4 320 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 DFFAO00273 331 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 TPST1O60507 370 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 PLEKHA8P1O95397 391 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 CPA2P48052 419 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 PHACTR4Q8IZ21 702 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 RDH13Q8NBN7 331 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 KAT2AQ92830 837 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 BHLHE41Q9C0J9 482 aaPredicted RBP9.46□□□□□ -0.9
COL12A1-211ENST00000615798 GPHNQ9NQX3 736 aaPredicted RBP9.46□□□□□ -0.9
COL12A1-211ENST00000615798 PADI2Q9Y2J8 665 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 OR6B1O95007 311 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 AMPD2Q01433 879 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 FAM149B1Q96BN6 582 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 THUMPD3Q9BV44 507 aaKnown RBP9.46□□□□□ -0.9
COL12A1-211ENST00000615798 VTI1BQ9UEU0 232 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 KANTRA0A1W2PQU2 76 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 TCEA3O75764 348 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 OMPP47874 163 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 PAPD7Q5XG87 772 aaKnown RBP9.46□□□□□ -0.9
COL12A1-211ENST00000615798 FAM196AQ6ZSG2 479 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 C8orf59Q8N0T1 100 aaPredicted RBP9.46□□□□□ -0.9
COL12A1-211ENST00000615798 APBB2Q92870 758 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 CST11Q9H112 138 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 ABCC6O95255 1503 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 SERPINA1P01009 418 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 PTSQ03393 145 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 SCFD2Q8WU76 684 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 ZHX1-C8orf76Q96EF9 292 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 PRELPP51888 382 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 MSLNQ13421 630 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-211ENST00000615798 ACAP1Q15027 740 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 CARTPTQ16568 116 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.45□□□□□ -0.9
COL12A1-211ENST00000615798 DENND5BQ6ZUT9 1274 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 TIGD4Q8IY51 512 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 MCFD2Q8NI22 146 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 BAP1Q92560 729 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 DLG3Q92796 817 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 ZNF471Q9BX82 626 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-211ENST00000615798 FHOD1Q9Y613 1164 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 MPDZO75970 2070 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 ATXN2Q99700 1313 aaKnown RBP9.45□□□□□ -0.9
COL12A1-211ENST00000615798 ZNF200P98182 395 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-211ENST00000615798 MAPK6Q16659 721 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 TXNRD1Q16881 649 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 HKDC1Q2TB90 917 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 ANO7Q6IWH7 933 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 KMT5AQ9NQR1 393 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 HEATR9A2RTY3 570 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 B8ZZF3 427 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 FAM47E-STBD1D6RA91 191 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 TGM6O95932 706 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 PGK2P07205 417 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 RGS19P49795 217 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 PDIA6Q15084 440 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 PDK3Q15120 406 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 COMMD2Q86X83 199 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 MTMR9Q96QG7 549 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 PAGR1Q9BTK6 254 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 NUP85Q9BW27 656 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 EXD2Q9NVH0 621 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 SNX8Q9Y5X2 465 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 PTGES3LE9PB15 166 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 PAICSP22234 425 aaKnown RBP9.45□□□□□ -0.9
COL12A1-211ENST00000615798 CHI3L1P36222 383 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-211ENST00000615798 CRELD2Q6UXH1 353 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-211ENST00000615798 ILKAPQ9H0C8 392 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-211ENST00000615798 FANCFQ9NPI8 374 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 UPB1Q9UBR1 384 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 SPTBP11277 2137 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 IRGMA1A4Y4 181 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 TLR2O60603 784 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 PRKCQQ04759 706 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 RAB30Q15771 203 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 TBCELQ5QJ74 424 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 SUSD4Q5VX71 490 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 CCNI2Q6ZMN8 369 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-211ENST00000615798 SRFBP1Q8NEF9 429 aaKnown RBP9.45□□□□□ -0.9
COL12A1-211ENST00000615798 STK32AQ8WU08 396 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 KRT35Q92764 455 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 HPS3Q969F9 1004 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 NSUN4Q96CB9 384 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms