RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 PACS1Q6VY07 963 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 RELL1Q8IUW5 271 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 KIAA0319LQ8IZA0 1049 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 PARP8Q8N3A8 854 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 SAMD3Q8N6K7 520 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 NAT16Q8N8M0 369 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 OR52K1Q8NGK4 314 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 ZFRQ96KR1 1074 aaKnown RBP12.06□□□□□ -0.48
CDH5-208ENST00000614547 PKP2Q99959 881 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 SSU72Q9NP77 194 aaKnown RBP12.06□□□□□ -0.48
CDH5-208ENST00000614547 SELENONQ9NZV5 590 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 HMGXB4Q9UGU5 601 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 TSPAN16Q9UKR8 245 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 UBIAD1Q9Y5Z9 338 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 TEX264Q9Y6I9 313 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 CHADO15335 359 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 TRIM13O60858 407 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 ENTPD3O75355 529 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 PABPC4LP0CB38 370 aaKnown RBP12.05□□□□□ -0.48
CDH5-208ENST00000614547 NR1H2P55055 460 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 TRAF2Q12933 501 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 FUT11Q495W5 492 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 TEDDM1Q5T9Z0 273 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 GK5Q6ZS86 529 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 FASTKD5Q7L8L6 764 aaKnown RBP12.05□□□□□ -0.48
CDH5-208ENST00000614547 PLD5Q8N7P1 536 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 WDR83Q9BRX9 315 aaKnown RBP12.05□□□□□ -0.48
CDH5-208ENST00000614547 TRPC7Q9HCX4 862 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 PCDHGB4Q9UN71 923 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 MYRFQ9Y2G1 1151 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 RIPK3Q9Y572 518 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 PCDHGB5Q9Y5G0 923 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 TOGARAM1Q9Y4F4 1720 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 SLC15A5A6NIM6 579 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 B4GALT5O43286 388 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 PLIN3O60664 434 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 ASS1P00966 412 aaKnown RBP12.05□□□□□ -0.48
CDH5-208ENST00000614547 OATP04181 439 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 HNRNPLP14866 589 aaKnown RBP eCLIP12.05□□□□□ -0.48
CDH5-208ENST00000614547 EIF4BP23588 611 aaKnown RBP12.05□□□□□ -0.48
CDH5-208ENST00000614547 PSMB4P28070 264 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 ENTPD1P49961 510 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 SLC5A3P53794 718 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 MAP3K10Q02779 954 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 SLC18A2Q05940 514 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 NOMO1Q15155 1222 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 DACT2Q5SW24 774 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 OTUD3Q5T2D3 398 aaPredicted RBP12.05□□□□□ -0.48
CDH5-208ENST00000614547 RSBN1LQ6PCB5 846 aaPredicted RBP12.05□□□□□ -0.48
CDH5-208ENST00000614547 KYAT3Q6YP21 454 aaKnown RBP12.05□□□□□ -0.48
CDH5-208ENST00000614547 AFAP1L2Q8N4X5 818 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 DDHD1Q8NEL9 900 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 TFB1MQ8WVM0 346 aaKnown RBP12.05□□□□□ -0.48
CDH5-208ENST00000614547 LRTOMTQ8WZ04 291 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 PHF21BQ96EK2 531 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 HPDLQ96IR7 371 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 ARMC7Q9H6L4 198 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 KDM1AO60341 852 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 ONECUT3O60422 494 aaPredicted RBP12.05□□□□□ -0.48
CDH5-208ENST00000614547 OCM2P0CE71 109 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 OCMP0CE72 109 aaPredicted RBP12.05□□□□□ -0.48
CDH5-208ENST00000614547 GABRB2P47870 512 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 NOVP48745 357 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 EIF2B2P49770 351 aaKnown RBP12.05□□□□□ -0.48
CDH5-208ENST00000614547 NDST1P52848 882 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 ITGADQ13349 1161 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 MSLNQ13421 630 aaPredicted RBP12.05□□□□□ -0.48
CDH5-208ENST00000614547 TCEAL1Q15170 157 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 DCAF6Q58WW2 860 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 SH3D19Q5HYK7 790 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 RWDD4Q6NW29 188 aaKnown RBP12.05□□□□□ -0.48
CDH5-208ENST00000614547 FAM183BPQ6ZVS7 135 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 EXOC8Q8IYI6 725 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 ADGRF2Q8IZF7 708 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 GCOM2Q9BZD3 368 aaPredicted RBP12.05□□□□□ -0.48
CDH5-208ENST00000614547 PLCH1Q4KWH8 1693 aa12.05□□□□□ -0.48
CDH5-208ENST00000614547 A0A1B0GTW7 788 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 AGRPO00253 132 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 OGTO15294 1046 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 CRHR1P34998 444 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 BOLA3Q53S33 107 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 PERM1Q5SV97 790 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 DRICH1Q6PGQ1 229 aaPredicted RBP12.04□□□□□ -0.48
CDH5-208ENST00000614547 ZNF554Q86TJ5 538 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 DDIASQ8IXT1 998 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 PPP1R13LQ8WUF5 828 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 KIF12Q96FN5 646 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 APBA2Q99767 749 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 IDI2Q9BXS1 227 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 MRPS26Q9BYN8 205 aaKnown RBP12.04□□□□□ -0.48
CDH5-208ENST00000614547 SIK2Q9H0K1 926 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 ATXN3LQ9H3M9 355 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 COQ10BQ9H8M1 238 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 ARHGEF4Q9NR80 690 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 SNX15Q9NRS6 342 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 EGFL7Q9UHF1 273 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 AP4E1Q9UPM8 1137 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 DMTF1Q9Y222 760 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 AP4S1Q9Y587 144 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 BCORQ6W2J9 1755 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms