RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 IGDCC3Q8IVU1 814 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 GSTCDQ8NEC7 633 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 FAM81AQ8TBF8 368 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 C10orf82Q8WW14 230 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 APOPT1Q96IL0 206 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 NSL1Q96IY1 281 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 EBF3Q9H4W6 596 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 NDE1Q9NXR1 346 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 RRN3Q9NYV6 651 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 APPL1Q9UKG1 709 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TDRKHQ9Y2W6 561 aaKnown RBP11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 KBTBD13C9JR72 458 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 FCHO1O14526 889 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PEX1O43933 1283 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 FBXO21O94952 628 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TOP3BO95985 862 aaKnown RBP11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MT-ND3P03897 115 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CYP2F1P24903 491 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TMEM62Q0P6H9 643 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 RABGAP1LQ5R372 815 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 IRGCQ6NXR0 463 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TAF2Q6P1X5 1199 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 NPNTQ6UXI9 565 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 APPL2Q8NEU8 664 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 INPP5DQ92835 1189 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SIGLEC10Q96LC7 697 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 NPY6RQ99463 290 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 BTBD10Q9BSF8 475 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 BRD8Q9H0E9 1235 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MANSC1Q9H8J5 431 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MOCS1Q9NZB8 636 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 A8MXQ7 604 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CYB561D2O14569 222 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SPTLC1O15269 473 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MAGEB3O15480 346 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TRIP10Q15642 601 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 OR52E8Q6IFG1 317 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SCUBE3Q8IX30 993 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 C7orf31Q8N865 590 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CSPG4P5Q96PW8 444 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ZNF184Q99676 751 aaPredicted RBP11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SAR1AQ9NR31 198 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PPM1HQ9ULR3 514 aa11.16□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MAGEA13PA6NCF6 341 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 LPXNO60711 386 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TPP2P29144 1249 aaPredicted RBP11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 NOS2P35228 1153 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 LILRA4P59901 499 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PDE1CQ14123 709 aaPredicted RBP11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 UBAP2LQ14157 1087 aaKnown RBP11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CA9Q16790 459 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 RAB6CQ53S08 254 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 OTUD1Q5VV17 481 aaPredicted RBP11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 NCBP2-AS2Q69YL0 99 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MRPL10Q7Z7H8 261 aaKnown RBP11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PRPF39Q86UA1 669 aaKnown RBP11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 LCA5Q86VQ0 697 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 GCNAQ96QF7 691 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 RAB6CQ9H0N0 254 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 UPF3AQ9H1J1 476 aaKnown RBP11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 NXF3Q9H4D5 531 aaKnown RBP11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TLE6Q9H808 572 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SLC38A7Q9NVC3 462 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ACADSP16219 412 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 RBL1P28749 1068 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SERPINB9P50453 376 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SEMA3BQ13214 749 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 KCTD21Q4G0X4 260 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 LGSNQ5TDP6 509 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 RIPOR1Q6ZS17 1223 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TLK2Q86UE8 772 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 GALNT4Q8N4A0 578 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PPM1NQ8N819 430 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 KCTD15Q96SI1 283 aaPredicted RBP11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 EBNA1BP2Q99848 306 aaKnown RBP11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TUBB6Q9BUF5 446 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 APOL6Q9BWW8 343 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 DPEP3Q9H4B8 488 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ANLNQ9NQW6 1124 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PIH1D1Q9NWS0 290 aaKnown RBP11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 IPPQ9Y573 584 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PCDHA11Q9Y5I1 949 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 KCNN4O15554 427 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ZBED1O96006 694 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 F7P08709 466 aaPredicted RBP11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MRPS5P82675 430 aaKnown RBP11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ZNF33AQ06730 810 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SLC10A2Q12908 348 aaPredicted RBP11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PAQR9Q6ZVX9 377 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 RAPH1Q70E73 1250 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 B3GALNT2Q8NCR0 500 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 OR6B3Q8NGW1 331 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ACMSDQ8TDX5 336 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 OSMRQ99650 979 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TRIM56Q9BRZ2 755 aaKnown RBP11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 NAT9Q9BTE0 207 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SNX25Q9H3E2 840 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 AP4E1Q9UPM8 1137 aa11.15□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 HEMK1Q9Y5R4 338 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms