RNA–Protein interactions for RNA: ENST00000614035.4

TNFAIP3-207, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-207ENST00000614035 MRGPRX3Q96LB0 322 aa18.27■□□□□ 0.52
TNFAIP3-207ENST00000614035 SLC2A13Q96QE2 648 aa18.27■□□□□ 0.52
TNFAIP3-207ENST00000614035 CPXM1Q96SM3 734 aa18.27■□□□□ 0.52
TNFAIP3-207ENST00000614035 MIR1-1HGQ9H1L0 117 aa18.27■□□□□ 0.52
TNFAIP3-207ENST00000614035 RSPH9Q9H1X1 276 aaPredicted RBP18.27■□□□□ 0.52
TNFAIP3-207ENST00000614035 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.27■□□□□ 0.52
TNFAIP3-207ENST00000614035 ASNSD1Q9NWL6 643 aa18.27■□□□□ 0.52
TNFAIP3-207ENST00000614035 NUMA1Q14980 2115 aa18.27■□□□□ 0.52
TNFAIP3-207ENST00000614035 DNTTP04053 509 aa18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 ST8SIA6P61647 398 aa18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 PITX1P78337 314 aaPredicted RBP18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 SIM1P81133 766 aaPredicted RBP18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 PTK2Q05397 1052 aa18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 MAN2A1Q16706 1144 aa18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 HNRNPA1L2Q32P51 320 aaKnown RBP18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 TTC31Q49AM3 519 aaPredicted RBP18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 PITRM1Q5JRX3 1037 aa18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 RAP1GAP2Q684P5 730 aa18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 ZNF776Q68DI1 518 aaPredicted RBP18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 CHSY1Q86X52 802 aa18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 LGI2Q8N0V4 545 aa18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 PPP1R13BQ96KQ4 1090 aa18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 CLSTN2Q9H4D0 955 aa18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 KIAA1522Q9P206 1035 aaPredicted RBP18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 EIF2B4Q9UI10 523 aaKnown RBP18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 AJAP1Q9UKB5 411 aaPredicted RBP18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.26■□□□□ 0.51
TNFAIP3-207ENST00000614035 SPAARA0A1B0GVQ0 90 aa18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 KCNU1A8MYU2 1149 aa18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 HSF2BPO75031 334 aa18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 KRT37O76014 449 aa18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 TOP3BO95985 862 aaKnown RBP18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 SLC2A3P11169 496 aa18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 TACR2P21452 398 aa18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 CDK17Q00537 523 aa18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 TPD52L1Q16890 204 aaPredicted RBP18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 EFHC1Q5JVL4 640 aa18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 MMS22LQ6ZRQ5 1243 aa18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 PASD1Q8IV76 773 aa18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 FAM114A1Q8IWE2 563 aa18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 ATP6V0D2Q8N8Y2 350 aa18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 PRMT1Q99873 361 aaKnown RBP18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 BTBD1Q9H0C5 482 aa18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 C6orf106Q9H6K1 298 aaPredicted RBP18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 SCML1Q9UN30 329 aa18.25■□□□□ 0.51
TNFAIP3-207ENST00000614035 ITIH6Q6UXX5 1313 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 F5H5T6 163 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 H0Y626 953 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 MOCS3O95396 460 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 SEMA4FO95754 770 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 PROS1P07225 676 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 SRPRAP08240 638 aaKnown RBP18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 SPINK2P20155 84 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 ERCC5P28715 1186 aaPredicted RBP18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 CCR1P32246 355 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 DPCR1Q3MIW9 517 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 IL27RAQ6UWB1 636 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 OLFML1Q6UWY5 402 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 USP30Q70CQ3 517 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 DEFB106AQ8N104 65 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 NOX5Q96PH1 765 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 SCNM1Q9BWG6 230 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 TMEM121BQ9BXQ6 578 aaPredicted RBP18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 ADAM33Q9BZ11 813 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 NDST4Q9H3R1 872 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 MTG2Q9H4K7 406 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 FAM204AQ9H8W3 233 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 SGK2Q9HBY8 427 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 OSGEPQ9NPF4 335 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 DDIT4Q9NX09 232 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 SLC12A6Q9UHW9 1150 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 DNAJC12Q9UKB3 198 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 ERVW-1Q9UQF0 538 aa18.24■□□□□ 0.51
TNFAIP3-207ENST00000614035 TARSL2A2RTX5 802 aaKnown RBP18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 FOXN3O00409 490 aaPredicted RBP18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 SIN3BO75182 1162 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 ZNF883P0CG24 379 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 CLCN1P35523 988 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 AFF3P51826 1226 aaKnown RBP18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 FAM193AP78312 1265 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 ECT2LQ008S8 904 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 BNC1Q01954 994 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 MTA1Q13330 715 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 SLC12A1Q13621 1099 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 VWA3BQ502W6 1294 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 MIIPQ5JXC2 388 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 C9orf64Q5T6V5 341 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 TTC39BQ5VTQ0 682 aaPredicted RBP18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 DPY19L2P1Q6NXN4 242 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 UNQ6494/PRO21346Q6UXR6 183 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 C11orf57Q6ZUT1 292 aaPredicted RBP18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 SLC47A2Q86VL8 602 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 FAM71AQ8IYT1 594 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 C1orf131Q8NDD1 294 aaKnown RBP18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 BIRC7Q96CA5 298 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 PABPC3Q9H361 631 aaKnown RBP18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 SLCO1B1Q9Y6L6 691 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 C1QTNF9BB2RNN3 333 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 SH3BP5O60239 455 aa18.23■□□□□ 0.51
TNFAIP3-207ENST00000614035 TRIM16O95361 564 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms