RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 FGF10O15520 208 aaPredicted RBP15.16■□□□□ 0.02
CD48-203ENST00000613788 ADH1CP00326 375 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 ATP1A1P05023 1023 aaKnown RBP15.16■□□□□ 0.02
CD48-203ENST00000613788 CD48P09326 243 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 PYGMP11217 842 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 VCPP55072 806 aaKnown RBP15.16■□□□□ 0.02
CD48-203ENST00000613788 GAD2Q05329 585 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 ZP2Q05996 745 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 RUNX3Q13761 415 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 DHCR24Q15392 516 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 TFDP3Q5H9I0 405 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 LY6G5CQ5SRR4 150 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 TRIM68Q6AZZ1 485 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 RHBDF2Q6PJF5 856 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 SPOCD1Q6ZMY3 1216 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 TMEM25Q86YD3 366 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 CCDC117Q8IWD4 279 aaPredicted RBP15.16■□□□□ 0.02
CD48-203ENST00000613788 CPA6Q8N4T0 437 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 TSC1Q92574 1164 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 IGSF8Q969P0 613 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 ASIC4Q96FT7 647 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 ZFYVE19Q96K21 471 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 PBKQ96KB5 322 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 CSPG4P5Q96PW8 444 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 CARD9Q9H257 536 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 EBF3Q9H4W6 596 aa15.16■□□□□ 0.02
CD48-203ENST00000613788 A0A1B0GVM2 712 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 TCAF2A6NFQ2 919 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 TBL1XO60907 577 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 CLDN11O75508 207 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 BMP1P13497 986 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 PRLRP16471 622 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 RHOQP17081 205 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 IL4RP24394 825 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 HOXC13P31276 330 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 CDKN2BP42772 138 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 CDH4P55283 916 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 RPS24P62847 133 aaKnown RBP15.15■□□□□ 0.02
CD48-203ENST00000613788 ANO4Q32M45 955 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 ANKRD20A8PQ5CZ79 823 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 SEL1L2Q5TEA6 688 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 MFSD7Q6UXD7 560 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 CFAP52Q8N1V2 620 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 FAF2Q96CS3 445 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 PRICKLE1Q96MT3 831 aaPredicted RBP15.15■□□□□ 0.02
CD48-203ENST00000613788 RNF157Q96PX1 679 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 BBS2Q9BXC9 721 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 ECT2Q9H8V3 914 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 MARK1Q9P0L2 795 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 SNX12Q9UMY4 172 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 EFR3BQ9Y2G0 817 aa15.15■□□□□ 0.02
CD48-203ENST00000613788 ASGR2P07307 311 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 ARSAP15289 507 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 TCP1P17987 556 aaKnown RBP15.14■□□□□ 0.01
CD48-203ENST00000613788 ERCC2P18074 760 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 MMRN1Q13201 1228 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 ZNF211Q13398 564 aaPredicted RBP15.14■□□□□ 0.01
CD48-203ENST00000613788 TDGQ13569 410 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 DPYSQ14117 519 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 TFDP2Q14188 446 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 PPP2R5EQ16537 467 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 TAZQ16635 292 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 ITPRIPL2Q3MIP1 535 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 FYB2Q5VWT5 728 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 PAPD7Q5XG87 772 aaKnown RBP15.14■□□□□ 0.01
CD48-203ENST00000613788 CHST9Q7L1S5 443 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 ZNF557Q8N988 423 aaPredicted RBP15.14■□□□□ 0.01
CD48-203ENST00000613788 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.14■□□□□ 0.01
CD48-203ENST00000613788 CSGALNACT1Q8TDX6 532 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 MYEOVQ96EZ4 313 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 PSMB7Q99436 277 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 TRPV5Q9NQA5 729 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 HPS4Q9NQG7 708 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 MPP6Q9NZW5 540 aa15.14■□□□□ 0.01
CD48-203ENST00000613788 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.13■□□□□ 0.01
CD48-203ENST00000613788 C19orf67A6NJJ6 358 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 WASH4PA8MWX3 477 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 NEDD8-MDP1E9PL57 170 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 HOXC11O43248 304 aaPredicted RBP15.13■□□□□ 0.01
CD48-203ENST00000613788 ZNF500O60304 480 aaPredicted RBP15.13■□□□□ 0.01
CD48-203ENST00000613788 PENKP01210 267 aaPredicted RBP15.13■□□□□ 0.01
CD48-203ENST00000613788 CYP17A1P05093 508 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 ADH5P11766 374 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 TYRP14679 529 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 ZFXP17010 805 aaPredicted RBP15.13■□□□□ 0.01
CD48-203ENST00000613788 AMPD1P23109 780 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 PTPN7P35236 360 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 SGSHP51688 502 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 AMPD2Q01433 879 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 TNK2Q07912 1038 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 ZNF177Q13360 481 aaPredicted RBP15.13■□□□□ 0.01
CD48-203ENST00000613788 ALFQ53S48 1182 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 ARTNQ5T4W7 220 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 DCAF12L1Q5VU92 463 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 RFX6Q8HWS3 928 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 PCDH19Q8TAB3 1148 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 BHMTQ93088 406 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 XPO6Q96QU8 1125 aaKnown RBP15.13■□□□□ 0.01
CD48-203ENST00000613788 OSBPL9Q96SU4 736 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 OSBPL8Q9BZF1 889 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms