RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 KCTD4Q8WVF5 259 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 TEKT5Q96M29 485 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 STRBPQ96SI9 672 aaKnown RBP8.94□□□□□ -0.98
TTC28-208ENST00000612946 RACGAP1Q9H0H5 632 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 SMPD3Q9NY59 655 aaPredicted RBP8.94□□□□□ -0.98
TTC28-208ENST00000612946 RABL2BQ9UNT1 228 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 CHADO15335 359 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 FAM153BP0C7A2 387 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 NPTX2P47972 431 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 ARHGDIBP52566 201 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 ERVK-9P63128 1117 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 MOGQ16653 247 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 METTL21CQ5VZV1 264 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 ACAD10Q6JQN1 1059 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 STK32CQ86UX6 486 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 DAGLBQ8NCG7 672 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 TLR10Q9BXR5 811 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 EPB41L1Q9H4G0 881 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 IFT80Q9P2H3 777 aaPredicted RBP8.94□□□□□ -0.98
TTC28-208ENST00000612946 UPB1Q9UBR1 384 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 FETUBQ9UGM5 382 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 ST3GAL5Q9UNP4 418 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 RPS6KL1Q9Y6S9 549 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 F8W031 263 aaPredicted RBP8.94□□□□□ -0.98
TTC28-208ENST00000612946 FAM120BQ96EK7 910 aaKnown RBP8.94□□□□□ -0.98
TTC28-208ENST00000612946 PPP1R36Q96LQ0 422 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 TMEM117Q9H0C3 514 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 PCIF1Q9H4Z3 704 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 INO80B-WBP1J3KQ70 363 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 SLIT1O75093 1534 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 RPA1P27694 616 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 HPCAL1P37235 193 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 RPL3P39023 403 aaKnown RBP8.94□□□□□ -0.98
TTC28-208ENST00000612946 GTF2H3Q13889 308 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 SKIV2LQ15477 1246 aaKnown RBP8.94□□□□□ -0.98
TTC28-208ENST00000612946 FNDC8Q8TC99 324 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 INO80BQ9C086 356 aaPredicted RBP8.94□□□□□ -0.98
TTC28-208ENST00000612946 SPEF2Q9C093 1822 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 TBC1D30Q9Y2I9 924 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 COX4I1P13073 169 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 POLD2P49005 469 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 MPP5Q8N3R9 675 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 TOP1MTQ969P6 601 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 DCUN1D1Q96GG9 259 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 CDRT15Q96T59 188 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 ITM2BQ9Y287 266 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 HECW2Q9P2P5 1572 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 NCANO14594 1321 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 FAM240BA0A1B0GVZ2 78 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 TRIM64A6NGJ6 449 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 TRIM64BA6NI03 449 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 PSMD12O00232 456 aaPredicted RBP8.94□□□□□ -0.98
TTC28-208ENST00000612946 BMP10O95393 424 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 ITGAVP06756 1048 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 PIK3CBP42338 1070 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 TRIM32Q13049 653 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 LRRC24Q50LG9 513 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 THEM5Q8N1Q8 247 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 LLGL1Q15334 1064 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 ZNF746Q6NUN9 644 aaPredicted RBP8.94□□□□□ -0.98
TTC28-208ENST00000612946 ZCCHC8Q6NZY4 707 aaKnown RBP8.94□□□□□ -0.98
TTC28-208ENST00000612946 BHLHB9Q6PI77 547 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 FAM13CQ8NE31 585 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 TCEAL3Q969E4 200 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 IQSEC2Q5JU85 1478 aa8.94□□□□□ -0.98
TTC28-208ENST00000612946 TUFMP49411 452 aaKnown RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 CDK9P50750 372 aaKnown RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 ATP12AP54707 1039 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 EIF6P56537 245 aaKnown RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 TMEM53Q6P2H8 277 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 THAP5Q7Z6K1 395 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 NIM1KQ8IY84 436 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 REPS1Q96D71 796 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 DSN1Q9H410 356 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 LRIG2O94898 1065 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 GJB6O95452 261 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 MVKQ03426 396 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 SMU1Q2TAY7 513 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 TTI2Q6NXR4 508 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 FAM228AQ86W67 206 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 KBTBD2Q8IY47 623 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 ARHGAP28Q9P2N2 729 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 SFMBT1Q9UHJ3 866 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 PKP3Q9Y446 797 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 DLC1Q96QB1 1528 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 TEX28O15482 410 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 CCNB1P14635 433 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 PSMA1P25786 263 aaKnown RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 SLC18A1P54219 525 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 DDB1Q16531 1140 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 GLRA4Q5JXX5 417 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 CCNYL2Q5T2Q4 361 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 VWA5B1Q5TIE3 1220 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 FAM71DQ8N9W8 422 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 SLC38A2Q96QD8 506 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 PIGSQ96S52 555 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 HOPXQ9BPY8 73 aaPredicted RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 ERVK-11Q9UQG0 969 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 GPR107Q5VW38 600 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 TMEM17Q86X19 198 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms