RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 ZNF334Q9HCZ1 680 aaPredicted RBP12.67□□□□□ -0.38
CBWD1-220ENST00000612045 VANGL2Q9ULK5 521 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 SHOC2Q9UQ13 582 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 ASB3Q9Y575 518 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 CEP290O15078 2479 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 OAS1P00973 400 aaKnown RBP12.66□□□□□ -0.38
CBWD1-220ENST00000612045 RB1P06400 928 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 C8AP07357 584 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 MX2P20592 715 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 FAM193AP78312 1265 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 BASP1P80723 227 aaKnown RBP12.66□□□□□ -0.38
CBWD1-220ENST00000612045 GALNT2Q10471 571 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 MTA1Q13330 715 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 ACBD5Q5T8D3 534 aaPredicted RBP12.66□□□□□ -0.38
CBWD1-220ENST00000612045 ANKRD22Q5VYY1 191 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 C4orf22Q6V702 233 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 HOOK3Q86VS8 718 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 ZNF683Q8IZ20 524 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 NAT8LQ8N9F0 302 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 P2RY11Q96G91 374 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 KLC2Q9H0B6 622 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 BRD8Q9H0E9 1235 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 EPB41L4BQ9H329 900 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 PABPC3Q9H361 631 aaKnown RBP12.66□□□□□ -0.38
CBWD1-220ENST00000612045 SEMA4AQ9H3S1 761 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 DNAJC17Q9NVM6 304 aaKnown RBP12.66□□□□□ -0.38
CBWD1-220ENST00000612045 NR2E3Q9Y5X4 410 aa12.66□□□□□ -0.38
CBWD1-220ENST00000612045 TCRBV7S3A2A0A539 114 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 C2orf78A6NCI8 922 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 GLUD1P00367 558 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 LRG1P02750 347 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 F11P03951 625 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 CA3P07451 260 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 MAGEA10P43363 369 aaPredicted RBP12.65□□□□□ -0.38
CBWD1-220ENST00000612045 COG7P83436 770 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 PPIDQ08752 370 aaKnown RBP12.65□□□□□ -0.38
CBWD1-220ENST00000612045 CAMK1Q14012 370 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 SHHQ15465 462 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 LRRC31Q6UY01 552 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 KRT222Q8N1A0 295 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 LZTR1Q8N653 840 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 CELF6Q96J87 481 aaKnown RBP12.65□□□□□ -0.38
CBWD1-220ENST00000612045 RUFY1Q96T51 708 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 FERMT1Q9BQL6 677 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 RNF38Q9H0F5 515 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 IL21Q9HBE4 155 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 RAB6BQ9NRW1 208 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 MPP6Q9NZW5 540 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 PPARGC1AQ9UBK2 798 aaKnown RBP12.65□□□□□ -0.38
CBWD1-220ENST00000612045 PLAAQ9Y263 795 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 NUP205Q92621 2012 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 ANAPC1Q9H1A4 1944 aa12.65□□□□□ -0.38
CBWD1-220ENST00000612045 IGLV3-10A0A075B6K4 115 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 WASH4PA8MWX3 477 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 H0YGN5 161 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 SMAPO00193 183 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 GRM6O15303 877 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 ZNF189O75820 626 aaPredicted RBP12.65□□□□□ -0.39
CBWD1-220ENST00000612045 STK10O94804 968 aaKnown RBP12.65□□□□□ -0.39
CBWD1-220ENST00000612045 GARSP41250 739 aaKnown RBP12.65□□□□□ -0.39
CBWD1-220ENST00000612045 KCNJ11Q14654 390 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 PABPC1LQ4VXU2 614 aaKnown RBP12.65□□□□□ -0.39
CBWD1-220ENST00000612045 ANKRD20A2Q5SQ80 823 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 ANKRD20A1Q5TYW2 823 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 ANKRD20A3Q5VUR7 823 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 RAP1GAP2Q684P5 730 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 CEP128Q6ZU80 1094 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 TRMT10CQ7L0Y3 403 aaKnown RBP12.65□□□□□ -0.39
CBWD1-220ENST00000612045 NLRP14Q86W24 1093 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 ARHGAP12Q8IWW6 846 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 RTL3Q8N8U3 475 aaKnown RBP12.65□□□□□ -0.39
CBWD1-220ENST00000612045 MICAL1Q8TDZ2 1067 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 PLD4Q96BZ4 506 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 HDAC11Q96DB2 347 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 RBM15Q96T37 977 aaKnown RBP eCLIP12.65□□□□□ -0.39
CBWD1-220ENST00000612045 PRMT1Q99873 361 aaKnown RBP12.65□□□□□ -0.39
CBWD1-220ENST00000612045 ZYG11BQ9C0D3 744 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 CDC42EP4Q9H3Q1 356 aaKnown RBP12.65□□□□□ -0.39
CBWD1-220ENST00000612045 NDFIP2Q9NV92 336 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 SEPT10Q9P0V9 454 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 NFS1Q9Y697 457 aa12.65□□□□□ -0.39
CBWD1-220ENST00000612045 A0A0A0MRY4 1105 aa12.64□□□□□ -0.39
CBWD1-220ENST00000612045 DRGXA6NNA5 263 aa12.64□□□□□ -0.39
CBWD1-220ENST00000612045 H3BQF6 201 aa12.64□□□□□ -0.39
CBWD1-220ENST00000612045 GOLGA8MH3BSY2 632 aa12.64□□□□□ -0.39
CBWD1-220ENST00000612045 RNF103O00237 685 aa12.64□□□□□ -0.39
CBWD1-220ENST00000612045 CHADO15335 359 aa12.64□□□□□ -0.39
CBWD1-220ENST00000612045 RIPK2O43353 540 aa12.64□□□□□ -0.39
CBWD1-220ENST00000612045 LPXNO60711 386 aa12.64□□□□□ -0.39
CBWD1-220ENST00000612045 TMEM63AO94886 807 aa12.64□□□□□ -0.39
CBWD1-220ENST00000612045 SYF2O95926 243 aaKnown RBP12.64□□□□□ -0.39
CBWD1-220ENST00000612045 RHOQP17081 205 aa12.64□□□□□ -0.39
CBWD1-220ENST00000612045 IRS1P35568 1242 aa12.64□□□□□ -0.39
CBWD1-220ENST00000612045 HARS2P49590 506 aaKnown RBP12.64□□□□□ -0.39
CBWD1-220ENST00000612045 CLCN4P51793 760 aa12.64□□□□□ -0.39
CBWD1-220ENST00000612045 WASHC5Q12768 1159 aa12.64□□□□□ -0.39
CBWD1-220ENST00000612045 HSP90B2PQ58FF3 399 aa12.64□□□□□ -0.39
CBWD1-220ENST00000612045 NADSYN1Q6IA69 706 aa12.64□□□□□ -0.39
CBWD1-220ENST00000612045 FBXL22Q6P050 247 aa12.64□□□□□ -0.39
CBWD1-220ENST00000612045 LRIG3Q6UXM1 1119 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms