RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 SETD3Q86TU7 594 aaPredicted RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 PSTKQ8IV42 348 aaKnown RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 C10orf107Q8IVU9 208 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 RBM15BQ8NDT2 890 aaKnown RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 HASPINQ8TF76 798 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 SIKE1Q9BRV8 207 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 DPEP3Q9H4B8 488 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 EML4Q9HC35 981 aaKnown RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 CYP4F12Q9HCS2 524 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 MAN1C1Q9NR34 630 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 NMRK1Q9NWW6 199 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 CYTH4Q9UIA0 394 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 ZNF180Q9UJW8 692 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 FARP1Q9Y4F1 1045 aaPredicted RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 ADGRA2Q96PE1 1338 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 UBA6A0AVT1 1052 aaPredicted RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 SLC15A5A6NIM6 579 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 TPBGLP0DKB5 382 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 TPSB2P20231 275 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 EPHX2P34913 555 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 GABRB2P47870 512 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 LHX1P48742 406 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 CPT1AP50416 773 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 CDK7P50613 346 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 GTF2A2P52657 109 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 WASHC5Q12768 1159 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 CDH17Q12864 832 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 MAPRE2Q15555 327 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 TPSAB1Q15661 275 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 ANO4Q32M45 955 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 C9orf57Q5W0N0 161 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 MYLK4Q86YV6 388 aaPredicted RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 DDIASQ8IXT1 998 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 ULK2Q8IYT8 1036 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 CCDC185Q8N715 623 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 CLEC4CQ8WTT0 213 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 CLPTM1LQ96KA5 538 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 C7orf26Q96N11 449 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 PEBP4Q96S96 227 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 KCTD15Q96SI1 283 aaPredicted RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 SPON2Q9BUD6 331 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 FICDQ9BVA6 458 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 GBA2Q9HCG7 927 aaPredicted RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 PRKAG3Q9UGI9 489 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 HBS1LQ9Y450 684 aaKnown RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 DTNAQ9Y4J8 743 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 MAGEB16A2A368 324 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 IQCA1LA6NCM1 817 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 TNPO2O14787 897 aaKnown RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 MFSD11O43934 449 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 VAPBO95292 243 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 LTFP02788 710 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 MPOP05164 745 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 SERPINA6P08185 405 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 GRIA1P42261 906 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 NAB1Q13506 487 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 CYLC2Q14093 348 aaPredicted RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 TAF1CQ15572 869 aaPredicted RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 HABP4Q5JVS0 413 aaKnown RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 SPDYAQ5MJ70 313 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 NOL9Q5SY16 702 aaKnown RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 C9orf131Q5VYM1 1079 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 SLC26A9Q7LBE3 791 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 RNF148Q8N7C7 305 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 PPTC7Q8NI37 304 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 DENND1AQ8TEH3 1009 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 EME1Q96AY2 570 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 ATXN3LQ9H3M9 355 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 EBF2Q9HAK2 575 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 PNPOQ9NVS9 261 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 SORCS3Q9UPU3 1222 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 TEX264Q9Y6I9 313 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 NRAPQ86VF7 1730 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 EDN1P05305 212 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 ATP5BP06576 529 aaKnown RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 HMBSP08397 361 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 NUMBP49757 651 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 YWHAHQ04917 246 aaPredicted RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 KRT72Q14CN4 511 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 CYTH1Q15438 398 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 FAM83EQ2M2I3 478 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 SLC25A52Q3SY17 297 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 SH3D19Q5HYK7 790 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 PRAMEF19Q5SWL8 479 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 NAIF1Q69YI7 327 aaPredicted RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 STRADAQ7RTN6 431 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 TTC30AQ86WT1 665 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 EFCAB3Q8N7B9 438 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 JADE3Q92613 823 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 SENP8Q96LD8 212 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 EIF2AQ9BY44 585 aaKnown RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 TKTL2Q9H0I9 626 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 EFCAB1Q9HAE3 211 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 THEGQ9P2T0 379 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 RBPJLQ9UBG7 517 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 NKX1-2Q9UD57 310 aaPredicted RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 TRHDEQ9UKU6 1024 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 SPDYE5A6NIY4 337 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 BHMG1C9JSJ3 638 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms